Description

Ensembl ID ENSSSCG00040054219 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 69914 bases Strand Plus strand
Position LUXQ01110806.1 : 2232559 - 2302472 RNA binding domain TruD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040031544 TruD PF01142 2.1e-73 1
ENSSSCP00040031721 TruD PF01142 2.2e-73 1
ENSSSCP00040031637 TruD PF01142 2.9e-46 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040073660 3431 649aa ENSSSCP00040031544
- ENSSSCT00040073837 2226 453aa ENSSSCP00040031637
- ENSSSCT00040074005 4042 660aa ENSSSCP00040031721

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004000754844.444426.4957sus_scrofa_meishanENSSSCP0004003172147.272728.1818

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172110099.8485sus_scrofa_usmarcENSSSCP0007003723291.666791.5278
ENSSSCG00040054219sus_scrofa_meishanENSSSCP00040031721100100sus_scrofa_tibetanENSSSCP00015012766100100
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172197.878897.8788sus_scrofaENSSSCP0000001636099.537899.5378
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172110099.8485sus_scrofa_wuzhishanENSSSCP0000504489891.666791.5278
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172110099.8485sus_scrofa_berkshireENSSSCP0006502341491.666791.5278
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172196.515293.6364ovis_aries_rambouilletENSOARP0002001171181.457879.0281
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172110099.8485sus_scrofa_jinhuaENSSSCP0006004689291.794291.6551
ENSSSCG00040054219sus_scrofa_meishanENSSSCP00040031721100100sus_scrofa_rongchangENSSSCP0003001614892.566692.5666
ENSSSCG00040054219sus_scrofa_meishanENSSSCP00040031721100100sus_scrofa_pietrainENSSSCP0005503766192.43792.437
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172195.151591.2121equus_caballusENSECAP0000003995486.980683.3795
ENSSSCG00040054219sus_scrofa_meishanENSSSCP00040031721100100sus_scrofa_largewhiteENSSSCP0002502786892.43792.437
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172190.151587.4242bos_taurusENSBTAP0000005541188.938786.2481
ENSSSCG00040054219sus_scrofa_meishanENSSSCP00040031721100100sus_scrofa_hampshireENSSSCP0003503367492.43792.437
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172110099.8485sus_scrofa_bameiENSSSCP0005003250691.794291.6551
ENSSSCG00040054219sus_scrofa_meishanENSSSCP0004003172197.878897.8788sus_scrofa_landraceENSSSCP0004504591499.537899.5378

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression