Description

Ensembl ID ENSSSCG00040048586 Gene ID Accession -
Symbol SERBP1 Alias - Full Name NA
Status Confidence Length 17202 bases Strand Minus strand
Position LUXQ01096080.1 : 380305 - 397506 RNA binding domain HABP4_PAI-RBP1 , IHABP4_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040027842 HABP4_PAI-RBP1 PF04774 2.3e-35 1
ENSSSCP00040027842 IHABP4_N PF16174 3.7e-44 2
ENSSSCP00040027746 HABP4_PAI-RBP1 PF04774 1e-34 1
ENSSSCP00040027746 IHABP4_N PF16174 4.6e-44 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SERBP1-201 ENSSSCT00040065513 5583 407aa ENSSSCP00040027746
SERBP1-202 ENSSSCT00040065728 1801 389aa ENSSSCP00040027842

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040048586sus_scrofa_meishanENSSSCP0004001689154.060342.4594sus_scrofa_meishanENSSSCP0004002774657.248244.9631

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040048586sus_scrofa_meishanENSSSCP0004002774698.525898.5258sus_scrofa_usmarcENSSSCP00070035059100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_tibetanENSSSCP00015035716100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofaENSSSCP00000004109100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_wuzhishanENSSSCP00005023111100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_berkshireENSSSCP00065049216100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP0004002774698.525898.2801ovis_aries_rambouilletENSOARP0002001251210099.7506
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_jinhuaENSSSCP00060044843100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_rongchangENSSSCP00030038689100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_pietrainENSSSCP00055038918100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP0004002774698.034496.5602equus_caballusENSECAP0000008214099.501298.005
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_largewhiteENSSSCP00025009487100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP0004002774694.840394.5946bos_taurusENSBTAP0000001721110099.7409
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_hampshireENSSSCP00035048378100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_bameiENSSSCP00050025075100100
ENSSSCG00040048586sus_scrofa_meishanENSSSCP00040027746100100sus_scrofa_landraceENSSSCP00045025648100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression