RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040048586 | Gene ID |
|
Accession |
- |
Symbol |
SERBP1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
17202 bases |
Strand |
Minus strand |
Position |
LUXQ01096080.1 : 380305 - 397506 |
RNA binding domain |
HABP4_PAI-RBP1 , IHABP4_N |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040027842 |
HABP4_PAI-RBP1 |
PF04774 |
2.3e-35 |
1 |
ENSSSCP00040027842 |
IHABP4_N |
PF16174 |
3.7e-44 |
2 |
ENSSSCP00040027746 |
HABP4_PAI-RBP1 |
PF04774 |
1e-34 |
1 |
ENSSSCP00040027746 |
IHABP4_N |
PF16174 |
4.6e-44 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SERBP1-201 |
ENSSSCT00040065513 |
5583 |
407aa |
ENSSSCP00040027746 |
SERBP1-202 |
ENSSSCT00040065728 |
1801 |
389aa |
ENSSSCP00040027842 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040016891 | 54.0603 | 42.4594 | sus_scrofa_meishan | ENSSSCP00040027746 | 57.2482 | 44.9631 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 98.5258 | 98.5258 | sus_scrofa_usmarc | ENSSSCP00070035059 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015035716 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa | ENSSSCP00000004109 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005023111 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065049216 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 98.5258 | 98.2801 | ovis_aries_rambouillet | ENSOARP00020012512 | 100 | 99.7506 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060044843 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030038689 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055038918 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 98.0344 | 96.5602 | equus_caballus | ENSECAP00000082140 | 99.5012 | 98.005 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025009487 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 94.8403 | 94.5946 | bos_taurus | ENSBTAP00000017211 | 100 | 99.7409 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035048378 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050025075 | 100 | 100 |
ENSSSCG00040048586 | sus_scrofa_meishan | ENSSSCP00040027746 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045025648 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |