RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040046686 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
88369 bases |
Strand |
Plus strand |
Position |
LUXQ01082146.1 : 1447661 - 1536029 |
RNA binding domain |
OST-HTH , TUDOR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040027332 |
OST-HTH |
PF12872 |
6.1e-31 |
1 |
ENSSSCP00040027332 |
OST-HTH |
PF12872 |
6.1e-31 |
2 |
ENSSSCP00040027332 |
OST-HTH |
PF12872 |
6.1e-31 |
3 |
ENSSSCP00040027332 |
TUDOR |
PF00567 |
1.5e-20 |
4 |
ENSSSCP00040027253 |
OST-HTH |
PF12872 |
7.5e-31 |
1 |
ENSSSCP00040027253 |
OST-HTH |
PF12872 |
7.5e-31 |
2 |
ENSSSCP00040027253 |
OST-HTH |
PF12872 |
7.5e-31 |
3 |
ENSSSCP00040027253 |
TUDOR |
PF00567 |
1.5e-20 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00040064575 |
3114 |
1037aa |
ENSSSCP00040027253 |
- |
ENSSSCT00040064706 |
2949 |
982aa |
ENSSSCP00040027332 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040040996 | 18.0851 | 6.64894 | sus_scrofa_meishan | ENSSSCP00040027253 | 6.55738 | 2.4108 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040043749 | 19.7952 | 9.30034 | sus_scrofa_meishan | ENSSSCP00040027253 | 22.3722 | 10.5111 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040045738 | 28.8052 | 13.748 | sus_scrofa_meishan | ENSSSCP00040027253 | 16.972 | 8.10029 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040001607 | 11.6135 | 5.47358 | sus_scrofa_meishan | ENSSSCP00040027253 | 23.5294 | 11.0897 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040029257 | 21.4025 | 9.47177 | sus_scrofa_meishan | ENSSSCP00040027253 | 22.6615 | 10.0289 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_usmarc | ENSSSCP00070023846 | 99.9036 | 99.9036 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 73.0955 | 72.5169 | sus_scrofa_tibetan | ENSSSCP00015012545 | 97.6804 | 96.9072 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.8071 | 99.7107 | sus_scrofa | ENSSSCP00000016462 | 99.9035 | 99.807 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.7107 | 99.7107 | sus_scrofa_wuzhishan | ENSSSCP00005025848 | 99.9034 | 99.9034 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_berkshire | ENSSSCP00065001194 | 98.7607 | 98.7607 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 92.9605 | 87.5603 | ovis_aries_rambouillet | ENSOARP00020029139 | 93.8656 | 88.4128 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060012838 | 98.8561 | 98.8561 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030033196 | 98.8561 | 98.8561 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_pietrain | ENSSSCP00055040307 | 99.9036 | 99.9036 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 91.514 | 86.0174 | equus_caballus | ENSECAP00000076407 | 87.4654 | 82.212 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_largewhite | ENSSSCP00025023294 | 99.9036 | 99.9036 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 91.514 | 86.6924 | bos_taurus | ENSBTAP00000003118 | 91.514 | 86.6924 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_hampshire | ENSSSCP00035011605 | 98.7607 | 98.7607 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.9036 | 99.9036 | sus_scrofa_bamei | ENSSSCP00050038488 | 98.7607 | 98.7607 |
ENSSSCG00040046686 | sus_scrofa_meishan | ENSSSCP00040027253 | 99.8071 | 99.8071 | sus_scrofa_landrace | ENSSSCP00045043804 | 99.8071 | 99.8071 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |