Description

Ensembl ID ENSSSCG00040043208 Gene ID Accession -
Symbol NXF1 Alias - Full Name NA
Status Confidence Length 44611 bases Strand Minus strand
Position LUXQ01092530.1 : 820954 - 865564 RNA binding domain NTF2 , Tap-RNA_bind , TAP_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040024145 NTF2 PF02136 2e-25 1
ENSSSCP00040024145 Tap-RNA_bind PF09162 2.6e-38 2
ENSSSCP00040024145 TAP_C PF03943 2e-24 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NXF1-201 ENSSSCT00040057945 4982 716aa ENSSSCP00040024145

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002128065.774447.6099sus_scrofa_meishanENSSSCP0004002414548.044734.7765
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002763172.49656.1208sus_scrofa_meishanENSSSCP0004002414563.687149.3017

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_usmarcENSSSCP00070042277100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_tibetanENSSSCP00015038894100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414599.301798.743sus_scrofaENSSSCP0000006095898.61398.0583
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414597.625797.486sus_scrofa_wuzhishanENSSSCP0000503573198.728898.5876
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_berkshireENSSSCP00065004868100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414584.217981.9832ovis_aries_rambouilletENSOARP0002002743497.258194.6774
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414599.58199.581sus_scrofa_jinhuaENSSSCP0006002214098.344898.3448
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_rongchangENSSSCP00030007239100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414599.860399.8603sus_scrofa_pietrainENSSSCP0005500690399.860399.8603
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414576.67673.8827equus_caballusENSECAP0000000361698.211194.6333
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_largewhiteENSSSCP00025043850100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414580.167677.933bos_taurusENSBTAP0000001248691.693389.1374
ENSSSCG00040043208sus_scrofa_meishanENSSSCP0004002414510099.8603sus_scrofa_hampshireENSSSCP0003502512710099.8603
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_bameiENSSSCP00050006492100100
ENSSSCG00040043208sus_scrofa_meishanENSSSCP00040024145100100sus_scrofa_landraceENSSSCP00045041336100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression