RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040043208 | Gene ID |
|
Accession |
- |
Symbol |
NXF1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
44611 bases |
Strand |
Minus strand |
Position |
LUXQ01092530.1 : 820954 - 865564 |
RNA binding domain |
NTF2 , Tap-RNA_bind , TAP_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040024145 |
NTF2 |
PF02136 |
2e-25 |
1 |
ENSSSCP00040024145 |
Tap-RNA_bind |
PF09162 |
2.6e-38 |
2 |
ENSSSCP00040024145 |
TAP_C |
PF03943 |
2e-24 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
NXF1-201 |
ENSSSCT00040057945 |
4982 |
716aa |
ENSSSCP00040024145 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040021280 | 65.7744 | 47.6099 | sus_scrofa_meishan | ENSSSCP00040024145 | 48.0447 | 34.7765 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040027631 | 72.496 | 56.1208 | sus_scrofa_meishan | ENSSSCP00040024145 | 63.6871 | 49.3017 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070042277 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015038894 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 99.3017 | 98.743 | sus_scrofa | ENSSSCP00000060958 | 98.613 | 98.0583 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 97.6257 | 97.486 | sus_scrofa_wuzhishan | ENSSSCP00005035731 | 98.7288 | 98.5876 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065004868 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 84.2179 | 81.9832 | ovis_aries_rambouillet | ENSOARP00020027434 | 97.2581 | 94.6774 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 99.581 | 99.581 | sus_scrofa_jinhua | ENSSSCP00060022140 | 98.3448 | 98.3448 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030007239 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 99.8603 | 99.8603 | sus_scrofa_pietrain | ENSSSCP00055006903 | 99.8603 | 99.8603 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 76.676 | 73.8827 | equus_caballus | ENSECAP00000003616 | 98.2111 | 94.6333 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025043850 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 80.1676 | 77.933 | bos_taurus | ENSBTAP00000012486 | 91.6933 | 89.1374 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 99.8603 | sus_scrofa_hampshire | ENSSSCP00035025127 | 100 | 99.8603 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050006492 | 100 | 100 |
ENSSSCG00040043208 | sus_scrofa_meishan | ENSSSCP00040024145 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045041336 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |