Description

Ensembl ID ENSSSCG00040035957 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 17498 bases Strand Minus strand
Position LUXQ01088807.1 : 1005534 - 1023031 RNA binding domain G-patch , R3H
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040020191 G-patch PF01585 1.2e-13 1
ENSSSCP00040020191 R3H PF01424 6.3e-12 2
ENSSSCP00040020177 G-patch PF01585 1.5e-13 1
ENSSSCP00040020177 R3H PF01424 7.7e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040048350 6369 784aa ENSSSCP00040020177
- ENSSSCT00040048384 5697 705aa ENSSSCP00040020191

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004000753953.448333.6207sus_scrofa_meishanENSSSCP000400201777.908164.97449
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004001877338.936520.9262sus_scrofa_meishanENSSSCP0004002017728.954115.5612

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017788.010287.8827sus_scrofa_usmarcENSSSCP0007004960410099.8551
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017789.413389.0306sus_scrofa_tibetanENSSSCP0001500440199.432699.0071
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofaENSSSCP0000001341810099.8725
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017788.010288.0102sus_scrofa_wuzhishanENSSSCP00005035900100100
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofa_berkshireENSSSCP0006502120110099.8725
ENSSSCG00040035957sus_scrofa_meishanENSSSCP00040020177100100sus_scrofa_jinhuaENSSSCP00060022457100100
ENSSSCG00040035957sus_scrofa_meishanENSSSCP00040020177100100sus_scrofa_rongchangENSSSCP00030023474100100
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofa_pietrainENSSSCP0005504334710099.8725
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017799.489898.852equus_caballusENSECAP0000001993899.489898.852
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofa_largewhiteENSSSCP0002504339710099.8725
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017798.979697.8316bos_taurusENSBTAP0000006554098.979697.8316
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofa_hampshireENSSSCP0003504390110099.8725
ENSSSCG00040035957sus_scrofa_meishanENSSSCP00040020177100100sus_scrofa_bameiENSSSCP00050031280100100
ENSSSCG00040035957sus_scrofa_meishanENSSSCP0004002017710099.8725sus_scrofa_landraceENSSSCP0004504251910099.8725

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression