RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040032694 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
43014 bases |
Strand |
Minus strand |
Position |
LUXQ01073005.1 : 2278536 - 2321549 |
RNA binding domain |
OB_Dis3 , RNB |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040018505 |
OB_Dis3 |
PF17849 |
2.2e-20 |
1 |
ENSSSCP00040018505 |
RNB |
PF00773 |
3e-87 |
2 |
ENSSSCP00040018531 |
OB_Dis3 |
PF17849 |
2.7e-20 |
1 |
ENSSSCP00040018531 |
RNB |
PF00773 |
3.6e-87 |
2 |
ENSSSCP00040018545 |
OB_Dis3 |
PF17849 |
3e-20 |
1 |
ENSSSCP00040018545 |
RNB |
PF00773 |
3.4e-87 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00040044036 |
5333 |
953aa |
ENSSSCP00040018505 |
- |
ENSSSCT00040044091 |
4851 |
1054aa |
ENSSSCP00040018531 |
- |
ENSSSCT00040044114 |
4674 |
995aa |
ENSSSCP00040018545 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040033241 | 56.785 | 36.3257 | sus_scrofa_meishan | ENSSSCP00040018531 | 51.6129 | 33.0171 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040025035 | 43.6543 | 25.2735 | sus_scrofa_meishan | ENSSSCP00040018531 | 37.8558 | 21.9165 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_usmarc | ENSSSCP00070012900 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015019371 | 97.5926 | 97.5926 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa | ENSSSCP00000005318 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 94.4972 | 94.4972 | sus_scrofa_wuzhishan | ENSSSCP00005037143 | 100 | 100 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_berkshire | ENSSSCP00065027328 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 97.2486 | 93.6433 | ovis_aries_rambouillet | ENSOARP00020009803 | 97.3409 | 93.7322 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060037983 | 100 | 100 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 94.4023 | 94.4023 | sus_scrofa_rongchang | ENSSSCP00030030615 | 100 | 100 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_pietrain | ENSSSCP00055048548 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 97.2486 | 92.8842 | equus_caballus | ENSECAP00000005829 | 97.1564 | 92.7962 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_largewhite | ENSSSCP00025016886 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 97.5332 | 94.4023 | bos_taurus | ENSBTAP00000000481 | 97.6258 | 94.4919 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_hampshire | ENSSSCP00035035295 | 99.9051 | 99.9051 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050002458 | 100 | 100 |
ENSSSCG00040032694 | sus_scrofa_meishan | ENSSSCP00040018531 | 99.9051 | 99.9051 | sus_scrofa_landrace | ENSSSCP00045011212 | 99.9051 | 99.9051 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |