| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040031005 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
15714 bases |
Strand |
Plus strand |
| Position |
LUXQ01043640.1 : 808761 - 824474 |
RNA binding domain |
RRM_1 , RBM39linker |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040017487 |
RRM_1 |
PF00076 |
9e-35 |
1 |
| ENSSSCP00040017487 |
RRM_1 |
PF00076 |
9e-35 |
2 |
| ENSSSCP00040017487 |
RBM39linker |
PF15519 |
1.8e-12 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00040041745 |
7000 |
433aa |
ENSSSCP00040017487 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040027995 | 26.2873 | 15.9892 | sus_scrofa_meishan | ENSSSCP00040017487 | 22.4018 | 13.6259 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040027863 | 26.8493 | 16.7123 | sus_scrofa_meishan | ENSSSCP00040017487 | 22.6328 | 14.0878 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040034253 | 22.7273 | 11.4973 | sus_scrofa_meishan | ENSSSCP00040017487 | 19.6305 | 9.93072 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040038712 | 60.9434 | 51.1321 | sus_scrofa_meishan | ENSSSCP00040017487 | 74.5958 | 62.5866 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040027763 | 26.4085 | 15.1408 | sus_scrofa_meishan | ENSSSCP00040017487 | 17.321 | 9.93072 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040015551 | 19.708 | 10.6569 | sus_scrofa_meishan | ENSSSCP00040017487 | 31.1778 | 16.8591 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040019254 | 21.0247 | 11.1307 | sus_scrofa_meishan | ENSSSCP00040017487 | 27.4827 | 14.5497 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040029712 | 30.3226 | 18.0645 | sus_scrofa_meishan | ENSSSCP00040017487 | 10.8545 | 6.46651 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040018608 | 30.3226 | 17.4194 | sus_scrofa_meishan | ENSSSCP00040017487 | 10.8545 | 6.23557 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040031394 | 28.5714 | 14.8352 | sus_scrofa_meishan | ENSSSCP00040017487 | 12.0092 | 6.23557 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040048110 | 29.4872 | 17.3077 | sus_scrofa_meishan | ENSSSCP00040017487 | 10.6236 | 6.23557 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040022849 | 17.6796 | 9.11602 | sus_scrofa_meishan | ENSSSCP00040017487 | 29.5612 | 15.2425 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040009567 | 17.3252 | 10.6383 | sus_scrofa_meishan | ENSSSCP00040017487 | 13.164 | 8.08314 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040031192 | 39.2857 | 23.2143 | sus_scrofa_meishan | ENSSSCP00040017487 | 10.1617 | 6.00462 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040026546 | 29.1066 | 16.4265 | sus_scrofa_meishan | ENSSSCP00040017487 | 23.3256 | 13.164 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040008360 | 27.1429 | 15.7143 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.94 | 12.7021 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040031551 | 21.576 | 10.6942 | sus_scrofa_meishan | ENSSSCP00040017487 | 26.5589 | 13.164 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040038789 | 19.7531 | 10.8025 | sus_scrofa_meishan | ENSSSCP00040017487 | 14.7806 | 8.08314 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040035241 | 20.9581 | 10.7784 | sus_scrofa_meishan | ENSSSCP00040017487 | 16.1663 | 8.31409 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040022723 | 16.6667 | 8.94309 | sus_scrofa_meishan | ENSSSCP00040017487 | 9.46882 | 5.08083 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040016186 | 16.129 | 9.67742 | sus_scrofa_meishan | ENSSSCP00040017487 | 6.92841 | 4.15704 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040001006 | 24.3386 | 12.963 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.2471 | 11.3164 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040041067 | 23.2295 | 13.5977 | sus_scrofa_meishan | ENSSSCP00040017487 | 18.9376 | 11.0855 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040041961 | 24.7423 | 15.7216 | sus_scrofa_meishan | ENSSSCP00040017487 | 22.1709 | 14.0878 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040019675 | 34.7059 | 22.3529 | sus_scrofa_meishan | ENSSSCP00040017487 | 13.6259 | 8.77598 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040024901 | 24.4624 | 14.7849 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.0162 | 12.7021 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040032621 | 13.8264 | 7.3955 | sus_scrofa_meishan | ENSSSCP00040017487 | 29.7921 | 15.9353 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040006717 | 25.8427 | 15.1685 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.2471 | 12.4711 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040028282 | 27.6923 | 14.4615 | sus_scrofa_meishan | ENSSSCP00040017487 | 20.7852 | 10.8545 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040042391 | 27.8746 | 15.6794 | sus_scrofa_meishan | ENSSSCP00040017487 | 18.4757 | 10.3926 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040009622 | 28.2313 | 13.6054 | sus_scrofa_meishan | ENSSSCP00040017487 | 19.1686 | 9.23787 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040006583 | 23.3333 | 13.5714 | sus_scrofa_meishan | ENSSSCP00040017487 | 22.6328 | 13.164 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040047074 | 26.4901 | 13.245 | sus_scrofa_meishan | ENSSSCP00040017487 | 18.4757 | 9.23787 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040021364 | 27.4286 | 14.2857 | sus_scrofa_meishan | ENSSSCP00040017487 | 11.0855 | 5.77367 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040037998 | 33.195 | 18.2573 | sus_scrofa_meishan | ENSSSCP00040017487 | 18.4757 | 10.1617 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040002965 | 35.0515 | 21.6495 | sus_scrofa_meishan | ENSSSCP00040017487 | 7.85219 | 4.84988 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040001417 | 30.9524 | 20.2381 | sus_scrofa_meishan | ENSSSCP00040017487 | 6.00462 | 3.9261 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040000266 | 27.5148 | 15.9763 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.4781 | 12.4711 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040003998 | 24.9322 | 15.1762 | sus_scrofa_meishan | ENSSSCP00040017487 | 21.2471 | 12.933 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 98.8453 | 98.1524 | sus_scrofa | ENSSSCP00000035936 | 99.7669 | 99.0676 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 99.0762 | 98.6143 | sus_scrofa_wuzhishan | ENSSSCP00005005706 | 96.4045 | 95.9551 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 90.9931 | 86.1432 | ovis_aries_rambouillet | ENSOARP00020024263 | 61.6588 | 58.3725 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030044748 | 100 | 100 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 98.8453 | 98.1524 | sus_scrofa_pietrain | ENSSSCP00055023792 | 99.7669 | 99.0676 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 96.0739 | 94.6882 | equus_caballus | ENSECAP00000052552 | 92.6503 | 91.314 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 93.7644 | 91.6859 | bos_taurus | ENSBTAP00000060316 | 87.5 | 85.5603 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 99.0762 | 98.3834 | sus_scrofa_hampshire | ENSSSCP00035029066 | 96.4045 | 95.7303 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050020959 | 100 | 100 |
| ENSSSCG00040031005 | sus_scrofa_meishan | ENSSSCP00040017487 | 98.8453 | 98.1524 | sus_scrofa_landrace | ENSSSCP00045003876 | 99.7669 | 99.0676 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
