Description

Ensembl ID ENSSSCG00040024669 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 32546 bases Strand Minus strand
Position LUXQ01068428.1 : 1016721 - 1049266 RNA binding domain Methyltransf_31 , UPF0020 , Met_10 , Methyltransf_15
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040013643 Methyltransf_31 PF13847 1.8e-07 1
ENSSSCP00040013643 UPF0020 PF01170 6.4e-07 2
ENSSSCP00040013643 Met_10 PF02475 7.8e-07 3
ENSSSCP00040013643 Methyltransf_15 PF09445 9.3e-42 4
ENSSSCP00040013617 Methyltransf_31 PF13847 1.8e-07 1
ENSSSCP00040013617 UPF0020 PF01170 6.5e-07 2
ENSSSCP00040013617 Met_10 PF02475 7.7e-07 3
ENSSSCP00040013617 Methyltransf_15 PF09445 9.4e-42 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040032962 4920 851aa ENSSSCP00040013617
- ENSSSCT00040033034 3559 846aa ENSSSCP00040013643

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040024669

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_usmarcENSSSCP0007000744899.294999.0599
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_tibetanENSSSCP0001503496599.294999.0599
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361789.424289.1892sus_scrofaENSSSCP0000002482097.689397.4326
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361798.824998.4724sus_scrofa_wuzhishanENSSSCP0000501173798.824998.4724
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_berkshireENSSSCP0006504956899.294999.0599
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.647599.6475sus_scrofa_jinhuaENSSSCP0006003854599.647599.6475
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.059998.7074sus_scrofa_rongchangENSSSCP0003002689199.059998.7074
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294998.9424sus_scrofa_pietrainENSSSCP0005500024199.294998.9424
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361785.428978.9659equus_caballusENSECAP0000009040584.731978.3217
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_largewhiteENSSSCP0002503203899.294999.0599
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361782.138775.6757bos_taurusENSBTAP0000000774982.042375.5869
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_hampshireENSSSCP0003504827499.294999.0599
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.76599.53sus_scrofa_bameiENSSSCP0005000475999.76599.53
ENSSSCG00040024669sus_scrofa_meishanENSSSCP0004001361799.294999.0599sus_scrofa_landraceENSSSCP0004502215099.294999.0599

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression