Description

Ensembl ID ENSSSCG00040019605 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 32964 bases Strand Plus strand
Position LUXQ01043599.1 : 176116 - 209079 RNA binding domain tRNA_anti-codon , tRNA-synt_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040011199 tRNA_anti-codon PF01336 5.7e-11 1
ENSSSCP00040011199 tRNA-synt_2 PF00152 8.9e-93 2
ENSSSCP00040011214 tRNA_anti-codon PF01336 6.3e-11 1
ENSSSCP00040011214 tRNA-synt_2 PF00152 2e-109 2
ENSSSCP00040011220 tRNA-synt_2 PF00152 1.6e-109 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040026475 2306 527aa ENSSSCP00040011199
- ENSSSCT00040026516 3098 559aa ENSSSCP00040011214
- ENSSSCT00040026530 2948 509aa ENSSSCP00040011220

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004000700145.492728.7212sus_scrofa_meishanENSSSCP0004001121438.819324.5081
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004000731141.286323.8589sus_scrofa_meishanENSSSCP0004001121435.599320.5725
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004003827223.412211.3325sus_scrofa_meishanENSSSCP0004001121433.631516.2791
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004004049928.264216.8971sus_scrofa_meishanENSSSCP0004001121432.915919.678

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121410099.8211sus_scrofa_usmarcENSSSCP0007002332610099.8211
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_tibetanENSSSCP00015009158100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121410099.8211sus_scrofaENSSSCP0000000489710099.8211
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_wuzhishanENSSSCP00005033960100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121490.697788.3721sus_scrofa_berkshireENSSSCP0006503654990.697788.3721
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121496.422293.9177ovis_aries_rambouilletENSOARP0002003101698.357795.8029
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_jinhuaENSSSCP00060000576100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121499.821199.8211sus_scrofa_rongchangENSSSCP0003001814099.821199.8211
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_pietrainENSSSCP00055037557100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121493.023389.9821equus_caballusENSECAP0000002420998.113294.9057
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_largewhiteENSSSCP00025043269100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP0004001121497.853395.5277bos_taurusENSBTAP0000002565997.853395.5277
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_hampshireENSSSCP00035031763100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_bameiENSSSCP00050025337100100
ENSSSCG00040019605sus_scrofa_meishanENSSSCP00040011214100100sus_scrofa_landraceENSSSCP00045030985100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression