RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040019605 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
32964 bases |
Strand |
Plus strand |
Position |
LUXQ01043599.1 : 176116 - 209079 |
RNA binding domain |
tRNA_anti-codon , tRNA-synt_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040011199 |
tRNA_anti-codon |
PF01336 |
5.7e-11 |
1 |
ENSSSCP00040011199 |
tRNA-synt_2 |
PF00152 |
8.9e-93 |
2 |
ENSSSCP00040011214 |
tRNA_anti-codon |
PF01336 |
6.3e-11 |
1 |
ENSSSCP00040011214 |
tRNA-synt_2 |
PF00152 |
2e-109 |
2 |
ENSSSCP00040011220 |
tRNA-synt_2 |
PF00152 |
1.6e-109 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00040026475 |
2306 |
527aa |
ENSSSCP00040011199 |
- |
ENSSSCT00040026516 |
3098 |
559aa |
ENSSSCP00040011214 |
- |
ENSSSCT00040026530 |
2948 |
509aa |
ENSSSCP00040011220 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040007001 | 45.4927 | 28.7212 | sus_scrofa_meishan | ENSSSCP00040011214 | 38.8193 | 24.5081 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040007311 | 41.2863 | 23.8589 | sus_scrofa_meishan | ENSSSCP00040011214 | 35.5993 | 20.5725 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040038272 | 23.4122 | 11.3325 | sus_scrofa_meishan | ENSSSCP00040011214 | 33.6315 | 16.2791 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040040499 | 28.2642 | 16.8971 | sus_scrofa_meishan | ENSSSCP00040011214 | 32.9159 | 19.678 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 99.8211 | sus_scrofa_usmarc | ENSSSCP00070023326 | 100 | 99.8211 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015009158 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 99.8211 | sus_scrofa | ENSSSCP00000004897 | 100 | 99.8211 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005033960 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 90.6977 | 88.3721 | sus_scrofa_berkshire | ENSSSCP00065036549 | 90.6977 | 88.3721 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 96.4222 | 93.9177 | ovis_aries_rambouillet | ENSOARP00020031016 | 98.3577 | 95.8029 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060000576 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 99.8211 | 99.8211 | sus_scrofa_rongchang | ENSSSCP00030018140 | 99.8211 | 99.8211 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055037557 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 93.0233 | 89.9821 | equus_caballus | ENSECAP00000024209 | 98.1132 | 94.9057 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025043269 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 97.8533 | 95.5277 | bos_taurus | ENSBTAP00000025659 | 97.8533 | 95.5277 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035031763 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050025337 | 100 | 100 |
ENSSSCG00040019605 | sus_scrofa_meishan | ENSSSCP00040011214 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045030985 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |