Description

Ensembl ID ENSSSCG00040016023 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 11886 bases Strand Minus strand
Position LUXQ01004354.1 : 67409 - 79294 RNA binding domain RNB
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040009116 RNB PF00773 2.6e-54 1
ENSSSCP00040009127 RNB PF00773 2.6e-54 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00040021832 8679 2892aa ENSSSCP00040009116
- ENSSSCT00040021856 8709 2902aa ENSSSCP00040009127

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004002403337.55122.8571sus_scrofa_meishanENSSSCP000400091273.170231.9297
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004003393628.267515.9068sus_scrofa_meishanENSSSCP000400091279.614065.41006
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004004526222.118412.4611sus_scrofa_meishanENSSSCP0004000912714.67958.27016
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004003666430.992116.7691sus_scrofa_meishanENSSSCP0004000912712.1646.58167
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004004302334.063719.9203sus_scrofa_meishanENSSSCP0004000912711.7856.8918
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004003407242.016826.0504sus_scrofa_meishanENSSSCP000400091271.722951.06823
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004001207537.005620.6215sus_scrofa_meishanENSSSCP0004000912713.54247.54652
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004004800030.697116.4879sus_scrofa_meishanENSSSCP0004000912715.78228.47691
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004003470227.72813.9387sus_scrofa_meishanENSSSCP0004000912725.568612.8532
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004001662733.979720.2216sus_scrofa_meishanENSSSCP0004000912712.68097.54652

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912797.587997.2433sus_scrofa_usmarcENSSSCP0007001896198.538698.1907
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.931199.8622sus_scrofa_tibetanENSSSCP0001500063199.931199.8622
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.896699.7932sus_scrofaENSSSCP0000000358599.896699.7932
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912796.726496.623sus_scrofa_wuzhishanENSSSCP0000504557699.39899.2918
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.483199.3453sus_scrofa_berkshireENSSSCP0006500414099.861699.7233
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.931199.8622sus_scrofa_jinhuaENSSSCP0006001469999.931199.8622
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.931199.7932sus_scrofa_rongchangENSSSCP0003004788499.931199.7932
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.620999.5176sus_scrofa_pietrainENSSSCP0005504720399.827399.7238
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912777.911868.918equus_caballusENSECAP0000007932475.64466.912
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.448799.2764sus_scrofa_largewhiteENSSSCP0002504878999.82799.6541
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.586599.4487sus_scrofa_hampshireENSSSCP0003501244999.792899.6547
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912710099.9655sus_scrofa_bameiENSSSCP0005001797310099.9655
ENSSSCG00040016023sus_scrofa_meishanENSSSCP0004000912799.517699.4142sus_scrofa_landraceENSSSCP0004501004999.723899.6202

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression