| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040014221 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
15919 bases |
Strand |
Minus strand |
| Position |
LUXQ01022153.1 : 3819636 - 3835554 |
RNA binding domain |
zf-U1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040007881 |
zf-U1 |
PF06220 |
1.8e-22 |
1 |
| ENSSSCP00040007872 |
zf-U1 |
PF06220 |
1e-20 |
1 |
| ENSSSCP00040007865 |
zf-U1 |
PF06220 |
1.2e-20 |
1 |
| ENSSSCP00040007887 |
zf-U1 |
PF06220 |
1.4e-20 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00040019108 |
1810 |
159aa |
ENSSSCP00040007865 |
| - |
ENSSSCT00040019123 |
1765 |
144aa |
ENSSSCP00040007872 |
| - |
ENSSSCT00040019142 |
1217 |
159aa |
ENSSSCP00040007881 |
| - |
ENSSSCT00040019152 |
1389 |
178aa |
ENSSSCP00040007887 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040014221 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa_usmarc | ENSSSCP00070010402 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa_tibetan | ENSSSCP00015037995 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa | ENSSSCP00000064859 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa_wuzhishan | ENSSSCP00005041579 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa_berkshire | ENSSSCP00065013413 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 80.8989 | 76.9663 | ovis_aries_rambouillet | ENSOARP00020028144 | 82.7586 | 78.7356 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | ovis_aries_rambouillet | ENSOARP00020025208 | 87.2222 | 86.6667 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 59.5506 | 52.809 | ovis_aries_rambouillet | ENSOARP00020011575 | 59.887 | 53.1073 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.764 | 88.2022 | sus_scrofa_jinhua | ENSSSCP00060046315 | 87.2928 | 86.7403 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 98.8764 | 98.3146 | sus_scrofa_rongchang | ENSSSCP00030048613 | 98.8764 | 98.3146 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 67.9775 | 63.4831 | sus_scrofa_pietrain | ENSSSCP00055026122 | 63.0208 | 58.8542 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | equus_caballus | ENSECAP00000023023 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.764 | 88.764 | sus_scrofa_largewhite | ENSSSCP00025030507 | 87.2928 | 87.2928 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 98.3146 | 96.6292 | bos_taurus | ENSBTAP00000065451 | 98.3146 | 96.6292 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.764 | 88.764 | sus_scrofa_hampshire | ENSSSCP00035013970 | 87.2928 | 87.2928 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 88.2022 | 87.6404 | sus_scrofa_bamei | ENSSSCP00050033722 | 86.7403 | 86.1878 |
| ENSSSCG00040014221 | sus_scrofa_meishan | ENSSSCP00040007887 | 67.9775 | 63.4831 | sus_scrofa_landrace | ENSSSCP00045047090 | 63.0208 | 58.8542 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
