RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040012962 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
143250 bases |
Strand |
Minus strand |
Position |
LUXQ01024697.1 : 1127089 - 1270338 |
RNA binding domain |
tRNA_anti-codon , tRNA-synt_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040007035 |
tRNA_anti-codon |
PF01336 |
2.4e-10 |
1 |
ENSSSCP00040007035 |
tRNA-synt_2 |
PF00152 |
9.6e-66 |
2 |
ENSSSCP00040007038 |
tRNA_anti-codon |
PF01336 |
2.8e-10 |
1 |
ENSSSCP00040007038 |
tRNA-synt_2 |
PF00152 |
8.3e-66 |
2 |
ENSSSCP00040007009 |
tRNA_anti-codon |
PF01336 |
2.8e-10 |
1 |
ENSSSCP00040007009 |
tRNA-synt_2 |
PF00152 |
1.3e-81 |
2 |
ENSSSCP00040007009 |
tRNA-synt_2 |
PF00152 |
1.3e-81 |
3 |
ENSSSCP00040007020 |
tRNA_anti-codon |
PF01336 |
3.3e-10 |
1 |
ENSSSCP00040007020 |
tRNA-synt_2 |
PF00152 |
8.9e-92 |
2 |
ENSSSCP00040007001 |
tRNA_anti-codon |
PF01336 |
3.4e-10 |
1 |
ENSSSCP00040007001 |
tRNA-synt_2 |
PF00152 |
1.2e-99 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00040017218 |
4308 |
477aa |
ENSSSCP00040007001 |
- |
ENSSSCT00040017235 |
2328 |
431aa |
ENSSSCP00040007009 |
- |
ENSSSCT00040017257 |
2216 |
468aa |
ENSSSCP00040007020 |
- |
ENSSSCT00040017293 |
7144 |
389aa |
ENSSSCP00040007035 |
- |
ENSSSCT00040017304 |
1578 |
424aa |
ENSSSCP00040007038 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007311 | 39.6266 | 22.4066 | sus_scrofa_meishan | ENSSSCP00040007001 | 40.0419 | 22.6415 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040011214 | 38.8193 | 24.5081 | sus_scrofa_meishan | ENSSSCP00040007001 | 45.4927 | 28.7212 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040038272 | 20.6725 | 10.3362 | sus_scrofa_meishan | ENSSSCP00040007001 | 34.8008 | 17.4004 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040040499 | 28.8786 | 16.2826 | sus_scrofa_meishan | ENSSSCP00040007001 | 39.413 | 22.2222 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.5807 | 99.1614 | sus_scrofa_usmarc | ENSSSCP00070025878 | 99.7899 | 99.3698 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 76.9392 | 74.2138 | sus_scrofa_tibetan | ENSSSCP00015009920 | 83.4091 | 80.4545 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.5807 | 99.3711 | sus_scrofa | ENSSSCP00000052306 | 99.5807 | 99.3711 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 51.5723 | 51.5723 | sus_scrofa_wuzhishan | ENSSSCP00005010031 | 99.5951 | 99.5951 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.7904 | 99.5807 | sus_scrofa_berkshire | ENSSSCP00065037518 | 99.7904 | 99.5807 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 87.4214 | 83.8574 | ovis_aries_rambouillet | ENSOARP00020032623 | 96.9767 | 93.0233 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.5807 | 99.5807 | sus_scrofa_jinhua | ENSSSCP00060037971 | 99.5807 | 99.5807 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.5807 | 99.3711 | sus_scrofa_rongchang | ENSSSCP00030046785 | 99.5807 | 99.3711 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.7904 | 99.5807 | sus_scrofa_pietrain | ENSSSCP00055029095 | 99.7904 | 99.5807 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.5807 | 99.3711 | sus_scrofa_largewhite | ENSSSCP00025043501 | 99.5807 | 99.3711 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 96.2264 | 91.8239 | bos_taurus | ENSBTAP00000048918 | 96.2264 | 91.8239 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.7904 | 99.5807 | sus_scrofa_hampshire | ENSSSCP00035024058 | 99.7904 | 99.5807 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.7904 | 99.7904 | sus_scrofa_bamei | ENSSSCP00050035840 | 99.7904 | 99.7904 |
ENSSSCG00040012962 | sus_scrofa_meishan | ENSSSCP00040007001 | 99.3711 | 99.1614 | sus_scrofa_landrace | ENSSSCP00045044127 | 99.3711 | 99.1614 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |