RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00040010336	Gene ID	100037994	Accession	-
Symbol	RPL14	Alias	-	Full Name	ribosomal protein L14
Status	Confidence	Length	7749 bases	Strand	Plus strand
Position	LUXQ01015501.1 : 390457 - 398205	RNA binding domain	Ribosomal_L14e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00040005129	Ribosomal_L14e	PF01929	1.6e-30	1
ENSSSCP00040005112	Ribosomal_L14e	PF01929	1.7e-30	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPL14-201	ENSSSCT00040013449	1064	213aa	ENSSSCP00040005112
RPL14-202	ENSSSCT00040013493	1378	211aa	ENSSSCP00040005129

Gene Model

Click here to download ENSSSCG00040010336's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00040010336's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00040010336	sus_scrofa_meishan	ENSSSCP00040046054	99.061	98.5916	sus_scrofa_meishan	ENSSSCP00040005112	99.061	98.5916

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00040010336	sus_scrofa_meishan	ENSSSCP00040005112	94.8357	93.4272	ovis_aries_rambouillet	ENSOARP00020023994	94.8357	93.4272
ENSSSCG00040010336	sus_scrofa_meishan	ENSSSCP00040005112	88.2629	84.9765	equus_caballus	ENSECAP00000042382	68.3636	65.8182
ENSSSCG00040010336	sus_scrofa_meishan	ENSSSCP00040005112	95.7747	94.8357	bos_taurus	ENSBTAP00000002642	95.7747	94.8357

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression