| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040009807 | Gene ID |
|
Accession |
- |
| Symbol |
CHD8 |
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
60768 bases |
Strand |
Plus strand |
| Position |
LUXQ01021704.1 : 154672 - 215439 |
RNA binding domain |
ResIII , BRK |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040004798 |
ResIII |
PF04851 |
1e-07 |
1 |
| ENSSSCP00040004798 |
BRK |
PF07533 |
1.7e-15 |
2 |
| ENSSSCP00040004828 |
ResIII |
PF04851 |
1.1e-07 |
1 |
| ENSSSCP00040004828 |
BRK |
PF07533 |
1.8e-15 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| CHD8-201 |
ENSSSCT00040012744 |
8830 |
2372aa |
ENSSSCP00040004798 |
| CHD8-202 |
ENSSSCT00040012813 |
8473 |
2589aa |
ENSSSCP00040004828 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040048763 | 39.3586 | 24.1011 | sus_scrofa_meishan | ENSSSCP00040004828 | 15.6431 | 9.57899 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040036086 | 20.0584 | 10.0917 | sus_scrofa_meishan | ENSSSCP00040004828 | 18.5786 | 9.34724 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040017749 | 32.8157 | 17.1506 | sus_scrofa_meishan | ENSSSCP00040004828 | 18.7717 | 9.81074 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040041202 | 28.1746 | 15.5754 | sus_scrofa_meishan | ENSSSCP00040004828 | 10.9695 | 6.06412 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040002359 | 33.8798 | 20.4614 | sus_scrofa_meishan | ENSSSCP00040004828 | 21.5527 | 13.0166 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040013864 | 39.1559 | 23.3294 | sus_scrofa_meishan | ENSSSCP00040004828 | 25.8015 | 15.3727 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040023506 | 57.8363 | 46.2899 | sus_scrofa_meishan | ENSSSCP00040004828 | 64.4264 | 51.5643 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040026469 | 36.9255 | 20.4437 | sus_scrofa_meishan | ENSSSCP00040004828 | 8.99961 | 4.98262 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040048640 | 39.3574 | 23.427 | sus_scrofa_meishan | ENSSSCP00040004828 | 11.3557 | 6.75937 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040017217 | 28.5425 | 15.2834 | sus_scrofa_meishan | ENSSSCP00040004828 | 10.8922 | 5.83237 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040022428 | 35.846 | 20.3689 | sus_scrofa_meishan | ENSSSCP00040004828 | 17.2654 | 9.81074 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040044365 | 36.9256 | 22.7024 | sus_scrofa_meishan | ENSSSCP00040004828 | 26.0718 | 16.0294 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040007589 | 24.7161 | 13.7912 | sus_scrofa_meishan | ENSSSCP00040004828 | 17.6516 | 9.84936 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040010190 | 48.2564 | 29.4062 | sus_scrofa_meishan | ENSSSCP00040004828 | 19.776 | 12.051 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040029923 | 29.8387 | 16.7494 | sus_scrofa_meishan | ENSSSCP00040004828 | 18.5786 | 10.4287 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040008525 | 47.3118 | 29.2712 | sus_scrofa_meishan | ENSSSCP00040004828 | 15.2955 | 9.46311 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040036943 | 37.931 | 24.5497 | sus_scrofa_meishan | ENSSSCP00040004828 | 28.4666 | 18.4241 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040025996 | 45.9489 | 30.4107 | sus_scrofa_meishan | ENSSSCP00040004828 | 15.9907 | 10.5832 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040045652 | 19.5006 | 11.8521 | sus_scrofa_meishan | ENSSSCP00040004828 | 23.8316 | 14.4844 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040009418 | 33.2056 | 19.6041 | sus_scrofa_meishan | ENSSSCP00040004828 | 20.085 | 11.8579 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040031711 | 33.6066 | 20.3657 | sus_scrofa_meishan | ENSSSCP00040004828 | 20.5871 | 12.4759 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040007952 | 36.6183 | 24.2121 | sus_scrofa_meishan | ENSSSCP00040004828 | 28.2735 | 18.6945 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040030178 | 26.8439 | 13.6364 | sus_scrofa_meishan | ENSSSCP00040004828 | 12.0896 | 6.14137 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040030957 | 19.7258 | 10.8133 | sus_scrofa_meishan | ENSSSCP00040004828 | 24.4496 | 13.4029 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040016532 | 36.4921 | 23.5602 | sus_scrofa_meishan | ENSSSCP00040004828 | 26.9216 | 17.3812 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040018119 | 16.7555 | 8.64417 | sus_scrofa_meishan | ENSSSCP00040004828 | 10.9309 | 5.63924 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040046079 | 50.0499 | 30.6082 | sus_scrofa_meishan | ENSSSCP00040004828 | 19.3897 | 11.8579 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040032620 | 52.0044 | 40.9342 | sus_scrofa_meishan | ENSSSCP00040004828 | 54.6157 | 42.9896 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040009190 | 55.5146 | 43.949 | sus_scrofa_meishan | ENSSSCP00040004828 | 63.9629 | 50.6373 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 99.691 | 99.691 | sus_scrofa_usmarc | ENSSSCP00070034313 | 99.9226 | 99.9226 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 91.2708 | 91.1163 | sus_scrofa_tibetan | ENSSSCP00015005243 | 99.6206 | 99.4519 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 99.691 | 99.691 | sus_scrofa | ENSSSCP00000035899 | 99.9226 | 99.9226 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005018140 | 99.9228 | 99.9228 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065029307 | 100 | 100 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 99.1503 | 98.9185 | ovis_aries_rambouillet | ENSOARP00020022482 | 99.3806 | 99.1483 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060011000 | 100 | 100 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 91.2708 | 91.1163 | sus_scrofa_rongchang | ENSSSCP00030015338 | 99.6206 | 99.4519 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055045164 | 100 | 100 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 99.4979 | 99.1889 | equus_caballus | ENSECAP00000014133 | 99.4211 | 99.1123 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025021314 | 100 | 100 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 88.4898 | 88.2194 | bos_taurus | ENSBTAP00000027215 | 99.4789 | 99.175 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035005752 | 100 | 100 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 91.2321 | 91.0776 | sus_scrofa_bamei | ENSSSCP00050002495 | 99.5784 | 99.4098 |
| ENSSSCG00040009807 | sus_scrofa_meishan | ENSSSCP00040004828 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045003013 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
