| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040005289 | Gene ID |
100153708 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
ataxin 2 |
| Status |
Confidence |
Length |
114902 bases |
Strand |
Plus strand |
| Position |
LUXQ01012035.1 : 1134329 - 1249230 |
RNA binding domain |
LsmAD , PAM2 , SM-ATX |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040002875 |
LsmAD |
PF06741 |
2.5e-15 |
1 |
| ENSSSCP00040002875 |
PAM2 |
PF07145 |
5.9e-06 |
2 |
| ENSSSCP00040002875 |
SM-ATX |
PF14438 |
8.7e-21 |
3 |
| ENSSSCP00040002861 |
LsmAD |
PF06741 |
2.6e-15 |
1 |
| ENSSSCP00040002861 |
PAM2 |
PF07145 |
6.4e-06 |
2 |
| ENSSSCP00040002861 |
SM-ATX |
PF14438 |
9.5e-21 |
3 |
| ENSSSCP00040002885 |
LsmAD |
PF06741 |
2.7e-15 |
1 |
| ENSSSCP00040002885 |
PAM2 |
PF07145 |
6.3e-06 |
2 |
| ENSSSCP00040002878 |
LsmAD |
PF06741 |
2.9e-15 |
1 |
| ENSSSCP00040002878 |
PAM2 |
PF07145 |
6.8e-06 |
2 |
| ENSSSCP00040002878 |
SM-ATX |
PF14438 |
1e-20 |
3 |
| ENSSSCP00040002844 |
LsmAD |
PF06741 |
3.2e-15 |
1 |
| ENSSSCP00040002844 |
PAM2 |
PF07145 |
7.3e-06 |
2 |
| ENSSSCP00040002844 |
SM-ATX |
PF14438 |
1.1e-20 |
3 |
| ENSSSCP00040002827 |
LsmAD |
PF06741 |
3.5e-15 |
1 |
| ENSSSCP00040002827 |
PAM2 |
PF07145 |
7.7e-06 |
2 |
| ENSSSCP00040002827 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
| ENSSSCP00040002808 |
LsmAD |
PF06741 |
3.5e-15 |
1 |
| ENSSSCP00040002808 |
PAM2 |
PF07145 |
7.6e-06 |
2 |
| ENSSSCP00040002808 |
SM-ATX |
PF14438 |
1.2e-20 |
3 |
| ENSSSCP00040002817 |
LsmAD |
PF06741 |
3.7e-15 |
1 |
| ENSSSCP00040002817 |
PAM2 |
PF07145 |
8.1e-06 |
2 |
| ENSSSCP00040002817 |
SM-ATX |
PF14438 |
1.3e-20 |
3 |
| ENSSSCP00040002832 |
LsmAD |
PF06741 |
4e-15 |
1 |
| ENSSSCP00040002832 |
PAM2 |
PF07145 |
8.4e-06 |
2 |
| ENSSSCP00040002832 |
SM-ATX |
PF14438 |
1.4e-20 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00040007085 |
5476 |
1177aa |
ENSSSCP00040002808 |
| - |
ENSSSCT00040007112 |
4292 |
1251aa |
ENSSSCP00040002817 |
| - |
ENSSSCT00040007132 |
4147 |
1203aa |
ENSSSCP00040002827 |
| - |
ENSSSCT00040007142 |
4479 |
1299aa |
ENSSSCP00040002832 |
| - |
ENSSSCT00040007167 |
4275 |
1140aa |
ENSSSCP00040002844 |
| - |
ENSSSCT00040007223 |
6310 |
1008aa |
ENSSSCP00040002861 |
| - |
ENSSSCT00040007251 |
5781 |
943aa |
ENSSSCP00040002875 |
| - |
ENSSSCT00040007262 |
6164 |
1078aa |
ENSSSCP00040002878 |
| - |
ENSSSCT00040007287 |
3615 |
1005aa |
ENSSSCP00040002885 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040032587 | 54.4715 | 39.4761 | sus_scrofa_meishan | ENSSSCP00040002832 | 46.4203 | 33.6413 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 99.923 | 99.923 | sus_scrofa_usmarc | ENSSSCP00070021896 | 99.923 | 99.923 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 83.7567 | 83.1409 | sus_scrofa_tibetan | ENSSSCP00015025251 | 92.4384 | 91.7587 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 99.6151 | 99.4611 | sus_scrofa | ENSSSCP00000031182 | 96.9288 | 96.779 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 78.8299 | 78.8299 | sus_scrofa_wuzhishan | ENSSSCP00005015072 | 80.6299 | 80.6299 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_berkshire | ENSSSCP00065047859 | 98.3375 | 97.7556 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 95.843 | 94.2263 | ovis_aries_rambouillet | ENSOARP00020022647 | 97.4178 | 95.7747 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_jinhua | ENSSSCP00060024678 | 98.3375 | 97.7556 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_rongchang | ENSSSCP00030036854 | 98.3375 | 97.7556 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 90.9931 | 90.4542 | sus_scrofa_pietrain | ENSSSCP00055035736 | 98.2544 | 97.6725 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 86.3741 | 84.8345 | equus_caballus | ENSECAP00000026122 | 95.7338 | 94.0273 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_largewhite | ENSSSCP00025011137 | 98.3375 | 97.7556 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 97.2286 | 95.458 | bos_taurus | ENSBTAP00000029618 | 96.1187 | 94.3683 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 90.9931 | 90.4542 | sus_scrofa_hampshire | ENSSSCP00035041437 | 98.2544 | 97.6725 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_bamei | ENSSSCP00050001657 | 98.3375 | 97.7556 |
| ENSSSCG00040005289 | sus_scrofa_meishan | ENSSSCP00040002832 | 91.0701 | 90.5312 | sus_scrofa_landrace | ENSSSCP00045037604 | 98.3375 | 97.7556 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
