| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00040004513 | Gene ID |
102167672 |
Accession |
- |
| Symbol |
SMARCA4 |
Alias |
- |
Full Name |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
| Status |
Confidence |
Length |
148415 bases |
Strand |
Plus strand |
| Position |
LUXQ01009020.1 : 1158088 - 1306502 |
RNA binding domain |
ResIII , BRK |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00040002363 |
ResIII |
PF04851 |
2.8e-09 |
1 |
| ENSSSCP00040002363 |
BRK |
PF07533 |
9.8e-07 |
2 |
| ENSSSCP00040002367 |
ResIII |
PF04851 |
2.9e-09 |
1 |
| ENSSSCP00040002367 |
BRK |
PF07533 |
2.2e-17 |
2 |
| ENSSSCP00040002380 |
ResIII |
PF04851 |
2.9e-09 |
1 |
| ENSSSCP00040002380 |
BRK |
PF07533 |
2.6e-17 |
2 |
| ENSSSCP00040002359 |
ResIII |
PF04851 |
2.9e-09 |
1 |
| ENSSSCP00040002359 |
BRK |
PF07533 |
2.6e-17 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| SMARCA4-201 |
ENSSSCT00040006026 |
5622 |
1647aa |
ENSSSCP00040002359 |
| SMARCA4-202 |
ENSSSCT00040006032 |
6215 |
1575aa |
ENSSSCP00040002363 |
| SMARCA4-203 |
ENSSSCT00040006038 |
6878 |
1633aa |
ENSSSCP00040002367 |
| SMARCA4-204 |
ENSSSCT00040006055 |
7408 |
1638aa |
ENSSSCP00040002380 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040048763 | 37.3178 | 23.1293 | sus_scrofa_meishan | ENSSSCP00040002359 | 23.3151 | 14.4505 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040036086 | 20.2669 | 10.1334 | sus_scrofa_meishan | ENSSSCP00040002359 | 29.5082 | 14.7541 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040017749 | 28.2917 | 16.0702 | sus_scrofa_meishan | ENSSSCP00040002359 | 25.4402 | 14.4505 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040041202 | 27.6786 | 17.0635 | sus_scrofa_meishan | ENSSSCP00040002359 | 16.9399 | 10.4432 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040013864 | 27.374 | 17.4091 | sus_scrofa_meishan | ENSSSCP00040002359 | 28.3546 | 18.0328 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040023506 | 18.8974 | 11.1304 | sus_scrofa_meishan | ENSSSCP00040002359 | 33.0905 | 19.49 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040026469 | 35.6577 | 19.9683 | sus_scrofa_meishan | ENSSSCP00040002359 | 13.6612 | 7.65027 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040048640 | 38.1526 | 22.49 | sus_scrofa_meishan | ENSSSCP00040002359 | 17.3042 | 10.2004 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040017217 | 25.8097 | 13.7652 | sus_scrofa_meishan | ENSSSCP00040002359 | 15.4827 | 8.25744 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040022428 | 26.7041 | 16.1989 | sus_scrofa_meishan | ENSSSCP00040002359 | 20.2186 | 12.2647 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040044365 | 25.93 | 16.2473 | sus_scrofa_meishan | ENSSSCP00040002359 | 28.7796 | 18.0328 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040007589 | 24.1211 | 13.4127 | sus_scrofa_meishan | ENSSSCP00040002359 | 27.0795 | 15.0577 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040010190 | 39.5853 | 25.8247 | sus_scrofa_meishan | ENSSSCP00040002359 | 25.5009 | 16.6363 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040029923 | 23.0769 | 14.268 | sus_scrofa_meishan | ENSSSCP00040002359 | 22.5865 | 13.9648 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040009190 | 19.0748 | 11.465 | sus_scrofa_meishan | ENSSSCP00040002359 | 34.5477 | 20.765 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040004828 | 21.5527 | 13.0166 | sus_scrofa_meishan | ENSSSCP00040002359 | 33.8798 | 20.4614 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040008525 | 46.1171 | 29.5102 | sus_scrofa_meishan | ENSSSCP00040002359 | 23.4366 | 14.997 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040036943 | 25.579 | 15.4915 | sus_scrofa_meishan | ENSSSCP00040002359 | 30.1761 | 18.2757 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040025996 | 40.1776 | 26.859 | sus_scrofa_meishan | ENSSSCP00040002359 | 21.9794 | 14.6934 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040045652 | 17.7623 | 11.1252 | sus_scrofa_meishan | ENSSSCP00040002359 | 34.1226 | 21.3722 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040009418 | 28.4163 | 17.1137 | sus_scrofa_meishan | ENSSSCP00040002359 | 27.0188 | 16.272 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040031711 | 86.1286 | 78.3102 | sus_scrofa_meishan | ENSSSCP00040002359 | 82.9387 | 75.4098 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040007952 | 25.1126 | 15.4577 | sus_scrofa_meishan | ENSSSCP00040002359 | 30.4797 | 18.7614 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040030178 | 29.4168 | 15.1801 | sus_scrofa_meishan | ENSSSCP00040002359 | 20.8257 | 10.7468 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040030957 | 17.2951 | 10.3459 | sus_scrofa_meishan | ENSSSCP00040002359 | 33.6976 | 20.1579 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040016532 | 24.9215 | 15.1309 | sus_scrofa_meishan | ENSSSCP00040002359 | 28.901 | 17.5471 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040018119 | 15.6898 | 8.40734 | sus_scrofa_meishan | ENSSSCP00040002359 | 16.0899 | 8.62174 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040046079 | 40.9771 | 26.6201 | sus_scrofa_meishan | ENSSSCP00040002359 | 24.9545 | 16.2113 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040032620 | 17.9478 | 11.2909 | sus_scrofa_meishan | ENSSSCP00040002359 | 29.6296 | 18.64 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070041483 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 99.3928 | 99.3928 | sus_scrofa_tibetan | ENSSSCP00015047158 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa | ENSSSCP00000031107 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 97.0249 | 96.8427 | sus_scrofa_wuzhishan | ENSSSCP00005044139 | 97.4985 | 97.3154 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065046422 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 99.15 | 99.0893 | ovis_aries_rambouillet | ENSOARP00020009473 | 99.6339 | 99.5729 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 97.4499 | 97.4499 | sus_scrofa_jinhua | ENSSSCP00060011253 | 97.9854 | 97.9854 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 93.1998 | 93.0783 | sus_scrofa_rongchang | ENSSSCP00030013792 | 99.546 | 99.4163 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055025218 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 97.7535 | 97.5106 | equus_caballus | ENSECAP00000064112 | 95.4923 | 95.255 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025045262 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 96.5999 | 96.4177 | bos_taurus | ENSBTAP00000059124 | 98.7585 | 98.5723 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035047694 | 100 | 100 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 95.7498 | 95.2641 | sus_scrofa_bamei | ENSSSCP00050029062 | 96.1585 | 95.6707 |
| ENSSSCG00040004513 | sus_scrofa_meishan | ENSSSCP00040002359 | 97.4499 | 97.4499 | sus_scrofa_landrace | ENSSSCP00045035294 | 97.9854 | 97.9854 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
