Description

Ensembl ID ENSSSCG00040000269 Gene ID 100519406 Accession -
Symbol TRMT5 Alias - Full Name tRNA methyltransferase 5
Status Confidence Length 13581 bases Strand Minus strand
Position LUXQ01006072.1 : 69559 - 83139 RNA binding domain Met_10
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00040000081 Met_10 PF02475 2.5e-62 1
ENSSSCP00040000086 Met_10 PF02475 2.6e-62 1
ENSSSCP00040000083 Met_10 PF02475 2.6e-62 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TRMT5-203 ENSSSCT00040000333 6669 499aa ENSSSCP00040000081
TRMT5-202 ENSSSCT00040000341 6644 504aa ENSSSCP00040000083
TRMT5-201 ENSSSCT00040000358 6644 504aa ENSSSCP00040000086

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000003840.154418.5328sus_scrofa_meishanENSSSCP0004000008320.63499.52381

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_usmarcENSSSCP0007005237399.801699.6032
ENSSSCG00040000269sus_scrofa_meishanENSSSCP00040000083100100sus_scrofa_tibetanENSSSCP00015005347100100
ENSSSCG00040000269sus_scrofa_meishanENSSSCP00040000083100100sus_scrofaENSSSCP00000055032100100
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008397.61997.0238sus_scrofa_wuzhishanENSSSCP0000502228498.99498.3903
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_berkshireENSSSCP0006504237799.801699.6032
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008394.642990.2778ovis_aries_rambouilletENSOARP0002001343472.163468.8351
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.8016sus_scrofa_jinhuaENSSSCP0006000221199.801699.8016
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.8016sus_scrofa_rongchangENSSSCP0003003531899.801699.8016
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_pietrainENSSSCP0005501368299.801699.6032
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008393.452489.6825equus_caballusENSECAP0000007229685.948982.4818
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_largewhiteENSSSCP0002503278899.801699.6032
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008393.25488.6905bos_taurusENSBTAP0000006314392.702288.1657
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008398.809598.4127sus_scrofa_hampshireENSSSCP0003500463898.809598.4127
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_bameiENSSSCP0005000537399.801699.6032
ENSSSCG00040000269sus_scrofa_meishanENSSSCP0004000008399.801699.6032sus_scrofa_landraceENSSSCP0004503224399.801699.6032

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression