RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00040000269 | Gene ID |
100519406 |
Accession |
- |
Symbol |
TRMT5 |
Alias |
- |
Full Name |
tRNA methyltransferase 5 |
Status |
Confidence |
Length |
13581 bases |
Strand |
Minus strand |
Position |
LUXQ01006072.1 : 69559 - 83139 |
RNA binding domain |
Met_10 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00040000081 |
Met_10 |
PF02475 |
2.5e-62 |
1 |
ENSSSCP00040000086 |
Met_10 |
PF02475 |
2.6e-62 |
1 |
ENSSSCP00040000083 |
Met_10 |
PF02475 |
2.6e-62 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
TRMT5-203 |
ENSSSCT00040000333 |
6669 |
499aa |
ENSSSCP00040000081 |
TRMT5-202 |
ENSSSCT00040000341 |
6644 |
504aa |
ENSSSCP00040000083 |
TRMT5-201 |
ENSSSCT00040000358 |
6644 |
504aa |
ENSSSCP00040000086 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000038 | 40.1544 | 18.5328 | sus_scrofa_meishan | ENSSSCP00040000083 | 20.6349 | 9.52381 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_usmarc | ENSSSCP00070052373 | 99.8016 | 99.6032 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015005347 | 100 | 100 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 100 | 100 | sus_scrofa | ENSSSCP00000055032 | 100 | 100 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 97.619 | 97.0238 | sus_scrofa_wuzhishan | ENSSSCP00005022284 | 98.994 | 98.3903 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_berkshire | ENSSSCP00065042377 | 99.8016 | 99.6032 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 94.6429 | 90.2778 | ovis_aries_rambouillet | ENSOARP00020013434 | 72.1634 | 68.8351 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.8016 | sus_scrofa_jinhua | ENSSSCP00060002211 | 99.8016 | 99.8016 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.8016 | sus_scrofa_rongchang | ENSSSCP00030035318 | 99.8016 | 99.8016 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_pietrain | ENSSSCP00055013682 | 99.8016 | 99.6032 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 93.4524 | 89.6825 | equus_caballus | ENSECAP00000072296 | 85.9489 | 82.4818 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_largewhite | ENSSSCP00025032788 | 99.8016 | 99.6032 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 93.254 | 88.6905 | bos_taurus | ENSBTAP00000063143 | 92.7022 | 88.1657 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 98.8095 | 98.4127 | sus_scrofa_hampshire | ENSSSCP00035004638 | 98.8095 | 98.4127 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_bamei | ENSSSCP00050005373 | 99.8016 | 99.6032 |
ENSSSCG00040000269 | sus_scrofa_meishan | ENSSSCP00040000083 | 99.8016 | 99.6032 | sus_scrofa_landrace | ENSSSCP00045032243 | 99.8016 | 99.6032 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |