RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00035079261 | Gene ID |
|
Accession |
- |
Symbol |
PNPT1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
44295 bases |
Strand |
Plus strand |
Position |
LUXS01067259.1 : 408034 - 452328 |
RNA binding domain |
RNase_PH , RNase_PH_C , PNPase , KH_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00035046909 |
RNase_PH |
PF01138 |
1.1e-39 |
1 |
ENSSSCP00035046909 |
RNase_PH |
PF01138 |
1.1e-39 |
2 |
ENSSSCP00035046909 |
RNase_PH_C |
PF03725 |
5.9e-16 |
3 |
ENSSSCP00035046909 |
PNPase |
PF03726 |
1.5e-07 |
4 |
ENSSSCP00035046909 |
KH_1 |
PF00013 |
9.6e-08 |
5 |
ENSSSCP00035046920 |
RNase_PH |
PF01138 |
7.5e-37 |
1 |
ENSSSCP00035046920 |
RNase_PH |
PF01138 |
7.5e-37 |
2 |
ENSSSCP00035046920 |
RNase_PH_C |
PF03725 |
5.8e-16 |
3 |
ENSSSCP00035046920 |
PNPase |
PF03726 |
1.5e-07 |
4 |
ENSSSCP00035046920 |
KH_1 |
PF00013 |
8.9e-08 |
5 |
ENSSSCP00035046974 |
RNase_PH |
PF01138 |
4.3e-34 |
1 |
ENSSSCP00035046974 |
RNase_PH |
PF01138 |
4.3e-34 |
2 |
ENSSSCP00035046974 |
RNase_PH_C |
PF03725 |
4.9e-16 |
3 |
ENSSSCP00035046974 |
PNPase |
PF03726 |
1.4e-07 |
4 |
ENSSSCP00035046974 |
KH_1 |
PF00013 |
8.2e-08 |
5 |
ENSSSCP00035046937 |
RNase_PH |
PF01138 |
5.9e-26 |
1 |
ENSSSCP00035046937 |
RNase_PH |
PF01138 |
5.9e-26 |
2 |
ENSSSCP00035046937 |
RNase_PH_C |
PF03725 |
4.6e-16 |
3 |
ENSSSCP00035046937 |
PNPase |
PF03726 |
1.3e-07 |
4 |
ENSSSCP00035046937 |
KH_1 |
PF00013 |
7.6e-08 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PNPT1-201 |
ENSSSCT00035108307 |
4793 |
784aa |
ENSSSCP00035046909 |
PNPT1-202 |
ENSSSCT00035108326 |
4748 |
769aa |
ENSSSCP00035046920 |
PNPT1-203 |
ENSSSCT00035108357 |
4580 |
713aa |
ENSSSCP00035046937 |
PNPT1-204 |
ENSSSCT00035108438 |
5289 |
729aa |
ENSSSCP00035046974 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035079261 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa | ENSSSCP00000045253 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 98.9796 | 98.7245 | sus_scrofa_berkshire | ENSSSCP00065003752 | 98.6023 | 98.3482 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 97.7041 | 94.7704 | equus_caballus | ENSECAP00000018223 | 93.5287 | 90.7204 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 97.9592 | 95.0255 | bos_taurus | ENSBTAP00000011729 | 98.0843 | 95.1469 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070051975 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005037735 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 98.9796 | 98.7245 | sus_scrofa_rongchang | ENSSSCP00030048374 | 98.6023 | 98.3482 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 93.1122 | 92.2194 | sus_scrofa_jinhua | ENSSSCP00060012179 | 94.1936 | 93.2903 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015027328 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 98.2143 | 95.7908 | ovis_aries_rambouillet | ENSOARP00020000192 | 98.2143 | 95.7908 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 93.1122 | 92.2194 | sus_scrofa_bamei | ENSSSCP00050018842 | 94.1936 | 93.2903 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040033567 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025042647 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045021527 | 100 | 100 |
ENSSSCG00035079261 | sus_scrofa_hampshire | ENSSSCP00035046909 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055039820 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |