Description

Ensembl ID ENSSSCG00035074957 Gene ID Accession -
Symbol FASTKD1 Alias - Full Name NA
Status Confidence Length 33772 bases Strand Minus strand
Position LUXS01051101.1 : 624761 - 658532 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00035043569 RAP PF08373 1.9e-16 1
ENSSSCP00035043569 FAST_2 PF08368 2.6e-28 2
ENSSSCP00035043569 FAST_1 PF06743 3.8e-21 3
ENSSSCP00035043395 RAP PF08373 2e-16 1
ENSSSCP00035043395 FAST_2 PF08368 2.3e-28 2
ENSSSCP00035043395 FAST_1 PF06743 2.2e-22 3
ENSSSCP00035043421 RAP PF08373 2.1e-16 1
ENSSSCP00035043421 FAST_2 PF08368 2.7e-28 2
ENSSSCP00035043421 FAST_1 PF06743 1.2e-10 3
ENSSSCP00035043588 RAP PF08373 2.1e-16 1
ENSSSCP00035043588 FAST_1 PF06743 4.9e-23 2
ENSSSCP00035043526 RAP PF08373 2.1e-16 1
ENSSSCP00035043526 FAST_2 PF08368 2.9e-28 2
ENSSSCP00035043526 FAST_1 PF06743 4.1e-21 3
ENSSSCP00035043407 RAP PF08373 2.2e-16 1
ENSSSCP00035043407 FAST_2 PF08368 2.8e-11 2
ENSSSCP00035043407 FAST_1 PF06743 5.5e-23 3
ENSSSCP00035043479 RAP PF08373 2.2e-16 1
ENSSSCP00035043479 FAST_2 PF08368 3.1e-28 2
ENSSSCP00035043479 FAST_1 PF06743 7.5e-22 3
ENSSSCP00035043402 RAP PF08373 2.2e-16 1
ENSSSCP00035043402 FAST_2 PF08368 2.5e-28 2
ENSSSCP00035043402 FAST_1 PF06743 8.2e-23 3
ENSSSCP00035043502 RAP PF08373 2.3e-16 1
ENSSSCP00035043502 FAST_2 PF08368 1.2e-13 2
ENSSSCP00035043502 FAST_1 PF06743 6e-23 3
ENSSSCP00035043439 RAP PF08373 2.4e-16 1
ENSSSCP00035043439 FAST_2 PF08368 2.9e-28 2
ENSSSCP00035043439 FAST_1 PF06743 9.7e-23 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
FASTKD1-201 ENSSSCT00035101838 3547 771aa ENSSSCP00035043395
FASTKD1-202 ENSSSCT00035101853 3003 813aa ENSSSCP00035043402
FASTKD1-203 ENSSSCT00035101869 2889 775aa ENSSSCP00035043407
FASTKD1-204 ENSSSCT00035101896 2874 770aa ENSSSCP00035043421
FASTKD1-209 ENSSSCT00035101931 5631 836aa ENSSSCP00035043439
FASTKD1-208 ENSSSCT00035102011 5520 799aa ENSSSCP00035043479
FASTKD1-207 ENSSSCT00035102061 5502 793aa ENSSSCP00035043502
FASTKD1-206 ENSSSCT00035102112 5499 792aa ENSSSCP00035043526
FASTKD1-205 ENSSSCT00035102187 5388 755aa ENSSSCP00035043569
FASTKD1-210 ENSSSCT00035102235 5388 755aa ENSSSCP00035043588

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003500628539.064923.0769sus_scrofa_hampshireENSSSCP0003504343930.980918.3014
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003502254634.809316.2362sus_scrofa_hampshireENSSSCP0003504343933.851715.7895
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504655535.849115.82sus_scrofa_hampshireENSSSCP0003504343929.545513.0383
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003503615639.873420.2532sus_scrofa_hampshireENSSSCP0003504343930.143515.311

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343997.607797.3684sus_scrofaENSSSCP0000002154496.56896.3314
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_berkshireENSSSCP00065004146100100
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343991.985683.4928equus_caballusENSECAP0000003356192.427983.8942
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343991.985684.5694bos_taurusENSBTAP0000005157092.427984.976
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_usmarcENSSSCP00070042204100100
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_wuzhishanENSSSCP00005028463100100
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343999.880499.8804sus_scrofa_rongchangENSSSCP0003000827999.880499.8804
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343910099.8804sus_scrofa_jinhuaENSSSCP0006001737110099.8804
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_tibetanENSSSCP00015028098100100
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343991.86684.0909ovis_aries_rambouilletENSOARP0002000588692.307784.4952
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343910099.7608sus_scrofa_bameiENSSSCP0005004800010099.7608
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343910099.7608sus_scrofa_meishanENSSSCP0004004090510099.7608
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP0003504343910099.8804sus_scrofa_largewhiteENSSSCP0002503027210099.8804
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_landraceENSSSCP00045023555100100
ENSSSCG00035074957sus_scrofa_hampshireENSSSCP00035043439100100sus_scrofa_pietrainENSSSCP00055038775100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression