RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00035074957 | Gene ID |
|
Accession |
- |
Symbol |
FASTKD1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
33772 bases |
Strand |
Minus strand |
Position |
LUXS01051101.1 : 624761 - 658532 |
RNA binding domain |
RAP , FAST_2 , FAST_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00035043569 |
RAP |
PF08373 |
1.9e-16 |
1 |
ENSSSCP00035043569 |
FAST_2 |
PF08368 |
2.6e-28 |
2 |
ENSSSCP00035043569 |
FAST_1 |
PF06743 |
3.8e-21 |
3 |
ENSSSCP00035043395 |
RAP |
PF08373 |
2e-16 |
1 |
ENSSSCP00035043395 |
FAST_2 |
PF08368 |
2.3e-28 |
2 |
ENSSSCP00035043395 |
FAST_1 |
PF06743 |
2.2e-22 |
3 |
ENSSSCP00035043421 |
RAP |
PF08373 |
2.1e-16 |
1 |
ENSSSCP00035043421 |
FAST_2 |
PF08368 |
2.7e-28 |
2 |
ENSSSCP00035043421 |
FAST_1 |
PF06743 |
1.2e-10 |
3 |
ENSSSCP00035043588 |
RAP |
PF08373 |
2.1e-16 |
1 |
ENSSSCP00035043588 |
FAST_1 |
PF06743 |
4.9e-23 |
2 |
ENSSSCP00035043526 |
RAP |
PF08373 |
2.1e-16 |
1 |
ENSSSCP00035043526 |
FAST_2 |
PF08368 |
2.9e-28 |
2 |
ENSSSCP00035043526 |
FAST_1 |
PF06743 |
4.1e-21 |
3 |
ENSSSCP00035043407 |
RAP |
PF08373 |
2.2e-16 |
1 |
ENSSSCP00035043407 |
FAST_2 |
PF08368 |
2.8e-11 |
2 |
ENSSSCP00035043407 |
FAST_1 |
PF06743 |
5.5e-23 |
3 |
ENSSSCP00035043479 |
RAP |
PF08373 |
2.2e-16 |
1 |
ENSSSCP00035043479 |
FAST_2 |
PF08368 |
3.1e-28 |
2 |
ENSSSCP00035043479 |
FAST_1 |
PF06743 |
7.5e-22 |
3 |
ENSSSCP00035043402 |
RAP |
PF08373 |
2.2e-16 |
1 |
ENSSSCP00035043402 |
FAST_2 |
PF08368 |
2.5e-28 |
2 |
ENSSSCP00035043402 |
FAST_1 |
PF06743 |
8.2e-23 |
3 |
ENSSSCP00035043502 |
RAP |
PF08373 |
2.3e-16 |
1 |
ENSSSCP00035043502 |
FAST_2 |
PF08368 |
1.2e-13 |
2 |
ENSSSCP00035043502 |
FAST_1 |
PF06743 |
6e-23 |
3 |
ENSSSCP00035043439 |
RAP |
PF08373 |
2.4e-16 |
1 |
ENSSSCP00035043439 |
FAST_2 |
PF08368 |
2.9e-28 |
2 |
ENSSSCP00035043439 |
FAST_1 |
PF06743 |
9.7e-23 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
FASTKD1-201 |
ENSSSCT00035101838 |
3547 |
771aa |
ENSSSCP00035043395 |
FASTKD1-202 |
ENSSSCT00035101853 |
3003 |
813aa |
ENSSSCP00035043402 |
FASTKD1-203 |
ENSSSCT00035101869 |
2889 |
775aa |
ENSSSCP00035043407 |
FASTKD1-204 |
ENSSSCT00035101896 |
2874 |
770aa |
ENSSSCP00035043421 |
FASTKD1-209 |
ENSSSCT00035101931 |
5631 |
836aa |
ENSSSCP00035043439 |
FASTKD1-208 |
ENSSSCT00035102011 |
5520 |
799aa |
ENSSSCP00035043479 |
FASTKD1-207 |
ENSSSCT00035102061 |
5502 |
793aa |
ENSSSCP00035043502 |
FASTKD1-206 |
ENSSSCT00035102112 |
5499 |
792aa |
ENSSSCP00035043526 |
FASTKD1-205 |
ENSSSCT00035102187 |
5388 |
755aa |
ENSSSCP00035043569 |
FASTKD1-210 |
ENSSSCT00035102235 |
5388 |
755aa |
ENSSSCP00035043588 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035006285 | 39.0649 | 23.0769 | sus_scrofa_hampshire | ENSSSCP00035043439 | 30.9809 | 18.3014 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035022546 | 34.8093 | 16.2362 | sus_scrofa_hampshire | ENSSSCP00035043439 | 33.8517 | 15.7895 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035046555 | 35.8491 | 15.82 | sus_scrofa_hampshire | ENSSSCP00035043439 | 29.5455 | 13.0383 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035036156 | 39.8734 | 20.2532 | sus_scrofa_hampshire | ENSSSCP00035043439 | 30.1435 | 15.311 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 97.6077 | 97.3684 | sus_scrofa | ENSSSCP00000021544 | 96.568 | 96.3314 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065004146 | 100 | 100 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 91.9856 | 83.4928 | equus_caballus | ENSECAP00000033561 | 92.4279 | 83.8942 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 91.9856 | 84.5694 | bos_taurus | ENSBTAP00000051570 | 92.4279 | 84.976 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070042204 | 100 | 100 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005028463 | 100 | 100 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 99.8804 | 99.8804 | sus_scrofa_rongchang | ENSSSCP00030008279 | 99.8804 | 99.8804 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 99.8804 | sus_scrofa_jinhua | ENSSSCP00060017371 | 100 | 99.8804 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015028098 | 100 | 100 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 91.866 | 84.0909 | ovis_aries_rambouillet | ENSOARP00020005886 | 92.3077 | 84.4952 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 99.7608 | sus_scrofa_bamei | ENSSSCP00050048000 | 100 | 99.7608 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 99.7608 | sus_scrofa_meishan | ENSSSCP00040040905 | 100 | 99.7608 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 99.8804 | sus_scrofa_largewhite | ENSSSCP00025030272 | 100 | 99.8804 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045023555 | 100 | 100 |
ENSSSCG00035074957 | sus_scrofa_hampshire | ENSSSCP00035043439 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055038775 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |