RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00035061132 | Gene ID |
100512225 |
Accession |
- |
Symbol |
LRPPRC |
Alias |
- |
Full Name |
leucine rich pentatricopeptide repeat containing |
Status |
Confidence |
Length |
120589 bases |
Strand |
Plus strand |
Position |
LUXS01080159.1 : 728001 - 848589 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00035034034 |
PPR_3 |
PF13812 |
9.4e-31 |
1 |
ENSSSCP00035034034 |
PPR_3 |
PF13812 |
9.4e-31 |
2 |
ENSSSCP00035034034 |
PPR_3 |
PF13812 |
9.4e-31 |
3 |
ENSSSCP00035034034 |
PPR_long |
PF17177 |
2.6e-25 |
4 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
5 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
6 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
7 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
8 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
9 |
ENSSSCP00035034034 |
PPR |
PF01535 |
4.4e-32 |
10 |
ENSSSCP00035034053 |
PPR_3 |
PF13812 |
1.3e-30 |
1 |
ENSSSCP00035034053 |
PPR_3 |
PF13812 |
1.3e-30 |
2 |
ENSSSCP00035034053 |
PPR_3 |
PF13812 |
1.3e-30 |
3 |
ENSSSCP00035034053 |
PPR_long |
PF17177 |
1.2e-24 |
4 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
5 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
6 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
7 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
8 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
9 |
ENSSSCP00035034053 |
PPR |
PF01535 |
5.2e-32 |
10 |
ENSSSCP00035034029 |
PPR_3 |
PF13812 |
1.3e-30 |
1 |
ENSSSCP00035034029 |
PPR_3 |
PF13812 |
1.3e-30 |
2 |
ENSSSCP00035034029 |
PPR_3 |
PF13812 |
1.3e-30 |
3 |
ENSSSCP00035034029 |
PPR_long |
PF17177 |
1.7e-24 |
4 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
5 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
6 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
7 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
8 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
9 |
ENSSSCP00035034029 |
PPR |
PF01535 |
5.9e-32 |
10 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
LRPPRC-201 |
ENSSSCT00035082111 |
6516 |
1422aa |
ENSSSCP00035034029 |
LRPPRC-202 |
ENSSSCT00035082127 |
6292 |
1369aa |
ENSSSCP00035034034 |
LRPPRC-203 |
ENSSSCT00035082173 |
6422 |
1415aa |
ENSSSCP00035034053 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035061132 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.398 | 96.9058 | sus_scrofa | ENSSSCP00000009020 | 98.6467 | 98.1481 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065025062 | 100 | 100 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 91.0689 | 85.5134 | equus_caballus | ENSECAP00000021242 | 93.9086 | 88.1798 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 91.9831 | 86.6385 | bos_taurus | ENSBTAP00000021773 | 94.0331 | 88.5694 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 95.5696 | 95.0774 | sus_scrofa_usmarc | ENSSSCP00070002882 | 99.2695 | 98.7582 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 94.3038 | 93.9522 | sus_scrofa_wuzhishan | ENSSSCP00005015003 | 96.8231 | 96.4621 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.398 | 96.9058 | sus_scrofa_rongchang | ENSSSCP00030021003 | 99.3544 | 98.8522 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 93.6709 | 93.4599 | sus_scrofa_jinhua | ENSSSCP00060012441 | 99.8501 | 99.6252 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.3277 | 96.8354 | sus_scrofa_tibetan | ENSSSCP00015022947 | 99.2826 | 98.7805 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 92.1238 | 86.9198 | ovis_aries_rambouillet | ENSOARP00020008104 | 93.9742 | 88.6657 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.398 | 96.9058 | sus_scrofa_bamei | ENSSSCP00050007598 | 99.3544 | 98.8522 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 99.9297 | 99.9297 | sus_scrofa_meishan | ENSSSCP00040003660 | 99.9297 | 99.9297 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.398 | 96.9058 | sus_scrofa_largewhite | ENSSSCP00025016910 | 99.3544 | 98.8522 |
ENSSSCG00035061132 | sus_scrofa_hampshire | ENSSSCP00035034029 | 97.398 | 96.9058 | sus_scrofa_landrace | ENSSSCP00045037686 | 99.3544 | 98.8522 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |