Description

Ensembl ID ENSSSCG00035061132 Gene ID 100512225 Accession -
Symbol LRPPRC Alias - Full Name leucine rich pentatricopeptide repeat containing
Status Confidence Length 120589 bases Strand Plus strand
Position LUXS01080159.1 : 728001 - 848589 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00035034034 PPR_3 PF13812 9.4e-31 1
ENSSSCP00035034034 PPR_3 PF13812 9.4e-31 2
ENSSSCP00035034034 PPR_3 PF13812 9.4e-31 3
ENSSSCP00035034034 PPR_long PF17177 2.6e-25 4
ENSSSCP00035034034 PPR PF01535 4.4e-32 5
ENSSSCP00035034034 PPR PF01535 4.4e-32 6
ENSSSCP00035034034 PPR PF01535 4.4e-32 7
ENSSSCP00035034034 PPR PF01535 4.4e-32 8
ENSSSCP00035034034 PPR PF01535 4.4e-32 9
ENSSSCP00035034034 PPR PF01535 4.4e-32 10
ENSSSCP00035034053 PPR_3 PF13812 1.3e-30 1
ENSSSCP00035034053 PPR_3 PF13812 1.3e-30 2
ENSSSCP00035034053 PPR_3 PF13812 1.3e-30 3
ENSSSCP00035034053 PPR_long PF17177 1.2e-24 4
ENSSSCP00035034053 PPR PF01535 5.2e-32 5
ENSSSCP00035034053 PPR PF01535 5.2e-32 6
ENSSSCP00035034053 PPR PF01535 5.2e-32 7
ENSSSCP00035034053 PPR PF01535 5.2e-32 8
ENSSSCP00035034053 PPR PF01535 5.2e-32 9
ENSSSCP00035034053 PPR PF01535 5.2e-32 10
ENSSSCP00035034029 PPR_3 PF13812 1.3e-30 1
ENSSSCP00035034029 PPR_3 PF13812 1.3e-30 2
ENSSSCP00035034029 PPR_3 PF13812 1.3e-30 3
ENSSSCP00035034029 PPR_long PF17177 1.7e-24 4
ENSSSCP00035034029 PPR PF01535 5.9e-32 5
ENSSSCP00035034029 PPR PF01535 5.9e-32 6
ENSSSCP00035034029 PPR PF01535 5.9e-32 7
ENSSSCP00035034029 PPR PF01535 5.9e-32 8
ENSSSCP00035034029 PPR PF01535 5.9e-32 9
ENSSSCP00035034029 PPR PF01535 5.9e-32 10

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
LRPPRC-201 ENSSSCT00035082111 6516 1422aa ENSSSCP00035034029
LRPPRC-202 ENSSSCT00035082127 6292 1369aa ENSSSCP00035034034
LRPPRC-203 ENSSSCT00035082173 6422 1415aa ENSSSCP00035034053

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035061132

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.39896.9058sus_scrofaENSSSCP0000000902098.646798.1481
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP00035034029100100sus_scrofa_berkshireENSSSCP00065025062100100
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402991.068985.5134equus_caballusENSECAP0000002124293.908688.1798
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402991.983186.6385bos_taurusENSBTAP0000002177394.033188.5694
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402995.569695.0774sus_scrofa_usmarcENSSSCP0007000288299.269598.7582
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402994.303893.9522sus_scrofa_wuzhishanENSSSCP0000501500396.823196.4621
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.39896.9058sus_scrofa_rongchangENSSSCP0003002100399.354498.8522
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402993.670993.4599sus_scrofa_jinhuaENSSSCP0006001244199.850199.6252
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.327796.8354sus_scrofa_tibetanENSSSCP0001502294799.282698.7805
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402992.123886.9198ovis_aries_rambouilletENSOARP0002000810493.974288.6657
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.39896.9058sus_scrofa_bameiENSSSCP0005000759899.354498.8522
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402999.929799.9297sus_scrofa_meishanENSSSCP0004000366099.929799.9297
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.39896.9058sus_scrofa_largewhiteENSSSCP0002501691099.354498.8522
ENSSSCG00035061132sus_scrofa_hampshireENSSSCP0003503402997.39896.9058sus_scrofa_landraceENSSSCP0004503768699.354498.8522

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression