RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00035049427	Gene ID		Accession	-
Symbol	C12orf65	Alias	-	Full Name	NA
Status	Confidence	Length	16324 bases	Strand	Plus strand
Position	LUXS01045515.1 : 2139572 - 2155895	RNA binding domain	RF-1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00035026734	RF-1	PF00472	1.1e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
C12orf65-201	ENSSSCT00035065898	4016	202aa	ENSSSCP00035026734

Gene Model

Click here to download ENSSSCG00035049427's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00035049427's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00035049427

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	82.1782	82.1782	sus_scrofa	ENSSSCP00000010437	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	99.0099	99.0099	sus_scrofa_berkshire	ENSSSCP00065026803	99.0099	99.0099
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	73.2673	68.8119	equus_caballus	ENSECAP00000080876	46.5409	43.7107
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	76.2376	73.7624	bos_taurus	ENSBTAP00000027321	89.5349	86.6279
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_usmarc	ENSSSCP00070028258	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_rongchang	ENSSSCP00030002917	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	99.505	99.505	sus_scrofa_jinhua	ENSSSCP00060002746	99.505	99.505
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_tibetan	ENSSSCP00015022829	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	74.7525	70.297	ovis_aries_rambouillet	ENSOARP00020008971	85.3107	80.226
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_bamei	ENSSSCP00050040505	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	99.0099	99.0099	sus_scrofa_meishan	ENSSSCP00040020815	99.0099	99.0099
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	99.505	99.505	sus_scrofa_largewhite	ENSSSCP00025009725	99.505	99.505
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_landrace	ENSSSCP00045048229	100	100
ENSSSCG00035049427	sus_scrofa_hampshire	ENSSSCP00035026734	100	100	sus_scrofa_pietrain	ENSSSCP00055004680	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression