RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00035027660	Gene ID	100037994	Accession	-
Symbol	RPL14	Alias	-	Full Name	ribosomal protein L14
Status	Confidence	Length	7764 bases	Strand	Plus strand
Position	LUXS01016608.1 : 96070 - 103833	RNA binding domain	Ribosomal_L14e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00035014560	Ribosomal_L14e	PF01929	1.7e-30	1
ENSSSCP00035014553	Ribosomal_L14e	PF01929	1.7e-30	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPL14-201	ENSSSCT00035036578	1065	213aa	ENSSSCP00035014553
RPL14-202	ENSSSCT00035036593	1379	211aa	ENSSSCP00035014560

Gene Model

Click here to download ENSSSCG00035027660's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00035027660's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035041303	99.061	97.6526	sus_scrofa_hampshire	ENSSSCP00035014553	99.061	97.6526

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa	ENSSSCP00000012018	100	100
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	99.5305	sus_scrofa_berkshire	ENSSSCP00065009146	100	99.5305
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	88.2629	84.9765	equus_caballus	ENSECAP00000042382	68.3636	65.8182
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	95.7747	94.8357	bos_taurus	ENSBTAP00000002642	95.7747	94.8357
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa_usmarc	ENSSSCP00070017848	100	100
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa_wuzhishan	ENSSSCP00005039286	100	100
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	99.5305	sus_scrofa_rongchang	ENSSSCP00030010930	100	99.5305
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa_jinhua	ENSSSCP00060022800	100	100
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa_tibetan	ENSSSCP00015003878	100	100
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	94.8357	93.4272	ovis_aries_rambouillet	ENSOARP00020023994	94.8357	93.4272
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	99.061	99.061	sus_scrofa_bamei	ENSSSCP00050009775	99.061	99.061
ENSSSCG00035027660	sus_scrofa_hampshire	ENSSSCP00035014553	100	100	sus_scrofa_largewhite	ENSSSCP00025011487	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression