Description

Ensembl ID ENSSSCG00035014258 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8603 bases Strand Plus strand
Position LUXS01025247.1 : 1639249 - 1647851 RNA binding domain RAP , FAST_2 , FAST_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00035006285 RAP PF08373 4.5e-16 1
ENSSSCP00035006285 FAST_2 PF08368 1.4e-26 2
ENSSSCP00035006285 FAST_1 PF06743 7.9e-19 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00035018060 2617 663aa ENSSSCP00035006285

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003504343930.980918.3014sus_scrofa_hampshireENSSSCP0003500628539.064923.0769
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003502254628.905315.3752sus_scrofa_hampshireENSSSCP0003500628535.444918.8537
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003504655532.365715.82sus_scrofa_hampshireENSSSCP0003500628533.63516.4404
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003503615638.132919.9367sus_scrofa_hampshireENSSSCP0003500628536.349919.0045

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.849299.8492sus_scrofaENSSSCP00000049294100100
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628595.927695.1735sus_scrofa_berkshireENSSSCP0006502698298.757897.9814
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628589.291182.3529equus_caballusENSECAP0000001257089.69782.7273
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628588.989480.6938bos_taurusENSBTAP0000004339489.393981.0606
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.849299.8492sus_scrofa_usmarcENSSSCP00070016823100100
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628510099.8492sus_scrofa_wuzhishanENSSSCP0000501843310099.8492
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.849299.5475sus_scrofa_rongchangENSSSCP0003002090299.849299.5475
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.849299.6983sus_scrofa_jinhuaENSSSCP0006000373499.849299.6983
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.849299.6983sus_scrofa_tibetanENSSSCP0001500920299.849299.6983
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628587.933680.543ovis_aries_rambouilletENSOARP0002002883888.467481.0319
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628595.776895.0226sus_scrofa_bameiENSSSCP0005004287597.993897.2222
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628599.698399.5475sus_scrofa_meishanENSSSCP0004001893599.698399.5475
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628595.776895.3243sus_scrofa_largewhiteENSSSCP0002500794398.602598.1366
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628510099.8492sus_scrofa_landraceENSSSCP0004504725810099.8492
ENSSSCG00035014258sus_scrofa_hampshireENSSSCP0003500628510099.8492sus_scrofa_pietrainENSSSCP0005503364710099.8492

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression