Description

Ensembl ID ENSSSCG00035008135 Gene ID Accession -
Symbol POLR3A Alias - Full Name NA
Status Confidence Length 58521 bases Strand Plus strand
Position LUXS01022602.1 : 62886 - 121406 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00035003425 RNA_pol_Rpb1_4 PF05000 7.3e-32 1
ENSSSCP00035003425 RNA_pol_Rpb1_1 PF04997 2.1e-96 2
ENSSSCP00035003425 RNA_pol_Rpb1_5 PF04998 6.6e-55 3
ENSSSCP00035003425 RNA_pol_Rpb1_5 PF04998 6.6e-55 4
ENSSSCP00035003425 RNA_pol_Rpb1_2 PF00623 3.9e-47 5
ENSSSCP00035003425 RNA_pol_Rpb1_2 PF00623 3.9e-47 6
ENSSSCP00035003425 RNA_pol_Rpb1_3 PF04983 6.6e-42 7
ENSSSCP00035003424 RNA_pol_Rpb1_4 PF05000 8.3e-32 1
ENSSSCP00035003424 RNA_pol_Rpb1_1 PF04997 2.5e-96 2
ENSSSCP00035003424 RNA_pol_Rpb1_5 PF04998 7.2e-89 3
ENSSSCP00035003424 RNA_pol_Rpb1_2 PF00623 7.6e-75 4
ENSSSCP00035003424 RNA_pol_Rpb1_3 PF04983 9e-42 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POLR3A-201 ENSSSCT00035010130 4653 1390aa ENSSSCP00035003424
POLR3A-202 ENSSSCT00035010134 4338 1285aa ENSSSCP00035003425

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500014338.837224.3023sus_scrofa_hampshireENSSSCP0003500342448.057630.0719
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003502960438.759725.168sus_scrofa_hampshireENSSSCP0003500342453.956835.036

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofaENSSSCP00000011013100100
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_berkshireENSSSCP0006502612399.144199.1441
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342499.496498.4173equus_caballusENSECAP0000004959798.644897.5749
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342499.712298.9209bos_taurusENSBTAP0000001763899.712298.9209
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_usmarcENSSSCP00070002709100100
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342498.70598.705sus_scrofa_wuzhishanENSSSCP0000503283897.860297.8602
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_rongchangENSSSCP0003001233699.144199.1441
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_jinhuaENSSSCP00060039053100100
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342484.172783.2374sus_scrofa_tibetanENSSSCP0001500336696.455195.3833
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342499.712298.5611ovis_aries_rambouilletENSOARP0002003422599.712298.5611
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_bameiENSSSCP00050031986100100
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_meishanENSSSCP0004001761499.144199.1441
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_largewhiteENSSSCP00025039892100100
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP0003500342410099.9281sus_scrofa_landraceENSSSCP0004503517499.144199.0728
ENSSSCG00035008135sus_scrofa_hampshireENSSSCP00035003424100100sus_scrofa_pietrainENSSSCP0005504687999.144199.1441

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression