| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00035006479 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
76377 bases |
Strand |
Minus strand |
| Position |
LUXS01003828.1 : 45481 - 121857 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1e , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00035002790 |
tRNA-synt_1g |
PF09334 |
2.6e-17 |
1 |
| ENSSSCP00035002790 |
tRNA-synt_1g |
PF09334 |
2.6e-17 |
2 |
| ENSSSCP00035002790 |
tRNA-synt_1e |
PF01406 |
1e-06 |
3 |
| ENSSSCP00035002790 |
tRNA-synt_1 |
PF00133 |
1.3e-41 |
4 |
| ENSSSCP00035002790 |
tRNA-synt_1 |
PF00133 |
1.3e-41 |
5 |
| ENSSSCP00035002790 |
Anticodon_1 |
PF08264 |
1e-16 |
6 |
| ENSSSCP00035002786 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
1 |
| ENSSSCP00035002786 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
2 |
| ENSSSCP00035002786 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00035002786 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00035002786 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00035002786 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00035002804 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
1 |
| ENSSSCP00035002804 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
2 |
| ENSSSCP00035002804 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00035002804 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00035002804 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00035002804 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00035002780 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00035002780 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00035002780 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00035002780 |
tRNA-synt_1 |
PF00133 |
1.9e-41 |
4 |
| ENSSSCP00035002780 |
tRNA-synt_1 |
PF00133 |
1.9e-41 |
5 |
| ENSSSCP00035002780 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00035002808 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00035002808 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00035002808 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00035002808 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00035002808 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00035002808 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00035002805 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00035002805 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00035002805 |
tRNA-synt_1e |
PF01406 |
1.1e-06 |
3 |
| ENSSSCP00035002805 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
4 |
| ENSSSCP00035002805 |
tRNA-synt_1 |
PF00133 |
1.7e-41 |
5 |
| ENSSSCP00035002805 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00035002767 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
1 |
| ENSSSCP00035002767 |
tRNA-synt_1g |
PF09334 |
3.5e-17 |
2 |
| ENSSSCP00035002767 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00035002767 |
tRNA-synt_1 |
PF00133 |
1.4e-40 |
4 |
| ENSSSCP00035002767 |
tRNA-synt_1 |
PF00133 |
1.4e-40 |
5 |
| ENSSSCP00035002767 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00035002809 |
tRNA-synt_1g |
PF09334 |
3.2e-09 |
1 |
| ENSSSCP00035002809 |
tRNA-synt_1e |
PF01406 |
1e-06 |
2 |
| ENSSSCP00035002809 |
tRNA-synt_1 |
PF00133 |
1.1e-27 |
3 |
| ENSSSCP00035002809 |
Anticodon_1 |
PF08264 |
9.7e-17 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00035008158 |
6263 |
1190aa |
ENSSSCP00035002767 |
| - |
ENSSSCT00035008191 |
6221 |
1176aa |
ENSSSCP00035002780 |
| - |
ENSSSCT00035008219 |
6125 |
1144aa |
ENSSSCP00035002786 |
| - |
ENSSSCT00035008226 |
5909 |
1072aa |
ENSSSCP00035002790 |
| - |
ENSSSCT00035008264 |
6107 |
1144aa |
ENSSSCP00035002804 |
| - |
ENSSSCT00035008267 |
6119 |
1148aa |
ENSSSCP00035002805 |
| - |
ENSSSCT00035008273 |
6107 |
1144aa |
ENSSSCP00035002808 |
| - |
ENSSSCT00035008282 |
3724 |
1073aa |
ENSSSCP00035002809 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035008644 | 23.0649 | 11.0242 | sus_scrofa_hampshire | ENSSSCP00035002767 | 24.7899 | 11.8487 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035044706 | 29.1574 | 13.5255 | sus_scrofa_hampshire | ENSSSCP00035002767 | 22.1008 | 10.2521 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035046693 | 25.6008 | 9.82236 | sus_scrofa_hampshire | ENSSSCP00035002767 | 20.5882 | 7.89916 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035014983 | 28.7194 | 13.1827 | sus_scrofa_hampshire | ENSSSCP00035002767 | 25.6303 | 11.7647 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035043653 | 24.5642 | 11.4105 | sus_scrofa_hampshire | ENSSSCP00035002767 | 26.0504 | 12.1008 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035008020 | 31.4815 | 14.3098 | sus_scrofa_hampshire | ENSSSCP00035002767 | 15.7143 | 7.14286 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035022334 | 30.0395 | 13.2411 | sus_scrofa_hampshire | ENSSSCP00035002767 | 25.5462 | 11.2605 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 98.7395 | 98.6555 | sus_scrofa | ENSSSCP00000072832 | 100 | 99.9149 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.6302 | 94.8739 | sus_scrofa_berkshire | ENSSSCP00065046360 | 92.2952 | 91.5653 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.8824 | 91.7647 | equus_caballus | ENSECAP00000090615 | 95.7215 | 91.6107 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 96.3025 | 92.2689 | bos_taurus | ENSBTAP00000008902 | 97.449 | 93.3673 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 94.3698 | 94.2017 | sus_scrofa_usmarc | ENSSSCP00070007040 | 100 | 99.8219 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.2941 | 95.1261 | sus_scrofa_wuzhishan | ENSSSCP00005023874 | 98.3521 | 98.1787 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.8824 | 94.958 | sus_scrofa_rongchang | ENSSSCP00030044135 | 91.6466 | 90.7631 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.7143 | 94.8739 | sus_scrofa_jinhua | ENSSSCP00060018257 | 92.3763 | 91.5653 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 94.0336 | 93.2773 | sus_scrofa_tibetan | ENSSSCP00015015405 | 97.8147 | 97.028 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 96.3866 | 92.2689 | ovis_aries_rambouillet | ENSOARP00020028522 | 97.534 | 93.3673 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 96.3866 | 92.3529 | ovis_aries_rambouillet | ENSOARP00020026191 | 97.534 | 93.4524 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.7143 | 94.958 | sus_scrofa_bamei | ENSSSCP00050017822 | 92.3763 | 91.6464 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 94.2857 | 93.3613 | sus_scrofa_meishan | ENSSSCP00040000872 | 91.3681 | 90.4723 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 100 | 99.916 | sus_scrofa_largewhite | ENSSSCP00025024463 | 100 | 99.916 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.9664 | 95.042 | sus_scrofa_landrace | ENSSSCP00045038045 | 91.7269 | 90.8434 |
| ENSSSCG00035006479 | sus_scrofa_hampshire | ENSSSCP00035002767 | 100 | 99.916 | sus_scrofa_pietrain | ENSSSCP00055044752 | 100 | 99.916 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
