RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00035000629 | Gene ID |
100518066 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
RNA polymerase I subunit A |
Status |
Confidence |
Length |
82530 bases |
Strand |
Minus strand |
Position |
LUXS01002738.1 : 2387985 - 2470514 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00035000142 |
RNA_pol_Rpb1_4 |
PF05000 |
3.3e-25 |
1 |
ENSSSCP00035000142 |
RNA_pol_Rpb1_1 |
PF04997 |
5.8e-22 |
2 |
ENSSSCP00035000142 |
RNA_pol_Rpb1_5 |
PF04998 |
4e-70 |
3 |
ENSSSCP00035000142 |
RNA_pol_Rpb1_2 |
PF00623 |
3.8e-70 |
4 |
ENSSSCP00035000142 |
RNA_pol_Rpb1_3 |
PF04983 |
4.2e-36 |
5 |
ENSSSCP00035000143 |
RNA_pol_Rpb1_4 |
PF05000 |
3.6e-25 |
1 |
ENSSSCP00035000143 |
RNA_pol_Rpb1_1 |
PF04997 |
8.1e-22 |
2 |
ENSSSCP00035000143 |
RNA_pol_Rpb1_5 |
PF04998 |
1.7e-101 |
3 |
ENSSSCP00035000143 |
RNA_pol_Rpb1_2 |
PF00623 |
4.3e-70 |
4 |
ENSSSCP00035000143 |
RNA_pol_Rpb1_3 |
PF04983 |
3.3e-36 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00035000706 |
5816 |
1582aa |
ENSSSCP00035000142 |
- |
ENSSSCT00035000712 |
6108 |
1720aa |
ENSSSCP00035000143 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035003424 | 48.0576 | 30.0719 | sus_scrofa_hampshire | ENSSSCP00035000143 | 38.8372 | 24.3023 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035029604 | 36.5375 | 22.4289 | sus_scrofa_hampshire | ENSSSCP00035000143 | 41.1047 | 25.2326 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa | ENSSSCP00000008782 | 99.9419 | 99.8837 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa_berkshire | ENSSSCP00065023495 | 99.9419 | 99.8837 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 95.814 | 92.2674 | equus_caballus | ENSECAP00000008753 | 95.814 | 92.2674 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 95.814 | 92.2674 | equus_caballus | ENSECAP00000040001 | 94.8762 | 91.3644 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 95.814 | 92.2674 | equus_caballus | ENSECAP00000063110 | 93.2654 | 89.8132 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 96.0465 | 92.2093 | bos_taurus | ENSBTAP00000008496 | 96.2143 | 92.3704 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.593 | 99.5349 | sus_scrofa_usmarc | ENSSSCP00070049504 | 99.8834 | 99.8251 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 96.1628 | 96.1628 | sus_scrofa_wuzhishan | ENSSSCP00005020992 | 98.9826 | 98.9826 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa_rongchang | ENSSSCP00030005804 | 99.8838 | 99.8257 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.8256 | 99.7674 | sus_scrofa_jinhua | ENSSSCP00060029230 | 99.8256 | 99.7674 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.8256 | 99.7674 | sus_scrofa_tibetan | ENSSSCP00015018454 | 99.8256 | 99.7674 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 94.4186 | 90.5233 | ovis_aries_rambouillet | ENSOARP00020004828 | 96.4371 | 92.4584 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.8256 | 99.7674 | sus_scrofa_bamei | ENSSSCP00050012223 | 99.8256 | 99.7674 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa_meishan | ENSSSCP00040000216 | 99.8838 | 99.8257 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.9419 | sus_scrofa_largewhite | ENSSSCP00025047405 | 99.9419 | 99.9419 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa_landrace | ENSSSCP00045033288 | 99.8838 | 99.8257 |
ENSSSCG00035000629 | sus_scrofa_hampshire | ENSSSCP00035000143 | 99.9419 | 99.8837 | sus_scrofa_pietrain | ENSSSCP00055031152 | 99.8838 | 99.8257 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |