| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00030070089 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
166921 bases |
Strand |
Plus strand |
| Position |
LUXR01094872.1 : 1510722 - 1677642 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00030045166 |
tRNA-synt_1g |
PF09334 |
1.7e-30 |
1 |
| ENSSSCP00030045166 |
tRNA-synt_1g |
PF09334 |
1.7e-30 |
2 |
| ENSSSCP00030045166 |
tRNA-synt_1 |
PF00133 |
4.6e-46 |
3 |
| ENSSSCP00030045166 |
tRNA-synt_1 |
PF00133 |
4.6e-46 |
4 |
| ENSSSCP00030045166 |
tRNA-synt_1 |
PF00133 |
4.6e-46 |
5 |
| ENSSSCP00030045166 |
Anticodon_1 |
PF08264 |
3.3e-10 |
6 |
| ENSSSCP00030045294 |
tRNA-synt_1g |
PF09334 |
1.8e-30 |
1 |
| ENSSSCP00030045294 |
tRNA-synt_1g |
PF09334 |
1.8e-30 |
2 |
| ENSSSCP00030045294 |
tRNA-synt_1 |
PF00133 |
7.4e-47 |
3 |
| ENSSSCP00030045294 |
tRNA-synt_1 |
PF00133 |
7.4e-47 |
4 |
| ENSSSCP00030045294 |
tRNA-synt_1 |
PF00133 |
7.4e-47 |
5 |
| ENSSSCP00030045294 |
Anticodon_1 |
PF08264 |
7.4e-08 |
6 |
| ENSSSCP00030045194 |
tRNA-synt_1g |
PF09334 |
2e-30 |
1 |
| ENSSSCP00030045194 |
tRNA-synt_1g |
PF09334 |
2e-30 |
2 |
| ENSSSCP00030045194 |
tRNA-synt_1 |
PF00133 |
8.7e-47 |
3 |
| ENSSSCP00030045194 |
tRNA-synt_1 |
PF00133 |
8.7e-47 |
4 |
| ENSSSCP00030045194 |
tRNA-synt_1 |
PF00133 |
8.7e-47 |
5 |
| ENSSSCP00030045194 |
Anticodon_1 |
PF08264 |
3.6e-10 |
6 |
| ENSSSCP00030045272 |
tRNA-synt_1g |
PF09334 |
4e-28 |
1 |
| ENSSSCP00030045272 |
tRNA-synt_1g |
PF09334 |
4e-28 |
2 |
| ENSSSCP00030045272 |
tRNA-synt_1 |
PF00133 |
3.5e-40 |
3 |
| ENSSSCP00030045272 |
tRNA-synt_1 |
PF00133 |
3.5e-40 |
4 |
| ENSSSCP00030045272 |
tRNA-synt_1 |
PF00133 |
3.5e-40 |
5 |
| ENSSSCP00030045272 |
Anticodon_1 |
PF08264 |
3.6e-10 |
6 |
| ENSSSCP00030045253 |
tRNA-synt_1g |
PF09334 |
3.6e-25 |
1 |
| ENSSSCP00030045253 |
tRNA-synt_1g |
PF09334 |
3.6e-25 |
2 |
| ENSSSCP00030045253 |
tRNA-synt_1 |
PF00133 |
4.5e-37 |
3 |
| ENSSSCP00030045253 |
tRNA-synt_1 |
PF00133 |
4.5e-37 |
4 |
| ENSSSCP00030045253 |
tRNA-synt_1 |
PF00133 |
4.5e-37 |
5 |
| ENSSSCP00030045253 |
Anticodon_1 |
PF08264 |
3.4e-10 |
6 |
| ENSSSCP00030045227 |
tRNA-synt_1g |
PF09334 |
3.5e-18 |
1 |
| ENSSSCP00030045227 |
tRNA-synt_1g |
PF09334 |
3.5e-18 |
2 |
| ENSSSCP00030045227 |
tRNA-synt_1 |
PF00133 |
1.6e-34 |
3 |
| ENSSSCP00030045227 |
tRNA-synt_1 |
PF00133 |
1.6e-34 |
4 |
| ENSSSCP00030045227 |
tRNA-synt_1 |
PF00133 |
1.6e-34 |
5 |
| ENSSSCP00030045227 |
tRNA-synt_1 |
PF00133 |
1.6e-34 |
6 |
| ENSSSCP00030045227 |
Anticodon_1 |
PF08264 |
3.2e-10 |
7 |
| ENSSSCP00030045320 |
tRNA-synt_1g |
PF09334 |
6.6e-18 |
1 |
| ENSSSCP00030045320 |
tRNA-synt_1g |
PF09334 |
6.6e-18 |
2 |
| ENSSSCP00030045320 |
tRNA-synt_1 |
PF00133 |
2.7e-32 |
3 |
| ENSSSCP00030045320 |
tRNA-synt_1 |
PF00133 |
2.7e-32 |
4 |
| ENSSSCP00030045320 |
tRNA-synt_1 |
PF00133 |
2.7e-32 |
5 |
| ENSSSCP00030045320 |
Anticodon_1 |
PF08264 |
3.4e-10 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00030098115 |
3919 |
867aa |
ENSSSCP00030045166 |
| - |
ENSSSCT00030098186 |
3981 |
902aa |
ENSSSCP00030045194 |
| - |
ENSSSCT00030098248 |
3860 |
851aa |
ENSSSCP00030045227 |
| - |
ENSSSCT00030098310 |
3920 |
872aa |
ENSSSCP00030045253 |
| - |
ENSSSCT00030098351 |
3865 |
854aa |
ENSSSCP00030045272 |
| - |
ENSSSCT00030098397 |
3840 |
880aa |
ENSSSCP00030045294 |
| - |
ENSSSCT00030098452 |
3746 |
859aa |
ENSSSCP00030045320 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030036316 | 21.3433 | 11.6418 | sus_scrofa_rongchang | ENSSSCP00030045194 | 31.7073 | 17.2949 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030029517 | 21.3166 | 9.61337 | sus_scrofa_rongchang | ENSSSCP00030045194 | 22.6164 | 10.1996 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030044135 | 21.6064 | 10.0402 | sus_scrofa_rongchang | ENSSSCP00030045194 | 29.8226 | 13.8581 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030044609 | 27.5895 | 15.1601 | sus_scrofa_rongchang | ENSSSCP00030045194 | 32.4834 | 17.8492 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030030846 | 20.8399 | 10.3803 | sus_scrofa_rongchang | ENSSSCP00030045194 | 29.1574 | 14.5233 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030007128 | 26.936 | 14.3098 | sus_scrofa_rongchang | ENSSSCP00030045194 | 17.7384 | 9.4235 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030029273 | 24.6548 | 13.0178 | sus_scrofa_rongchang | ENSSSCP00030045194 | 27.7162 | 14.6341 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 92.6829 | 88.0266 | equus_caballus | ENSECAP00000021951 | 85.0458 | 80.7731 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 89.0244 | 89.0244 | sus_scrofa_landrace | ENSSSCP00045018629 | 99.8756 | 99.8756 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.6674 | 99.6674 | sus_scrofa | ENSSSCP00000073491 | 99.6674 | 99.6674 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 96.3415 | 96.3415 | sus_scrofa_usmarc | ENSSSCP00070013657 | 98.9749 | 98.9749 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.4457 | 99.2239 | sus_scrofa_wuzhishan | ENSSSCP00005042128 | 99.6667 | 99.4444 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.7783 | 99.7783 | sus_scrofa_jinhua | ENSSSCP00060007252 | 99.7783 | 99.7783 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.7783 | 99.6674 | sus_scrofa_hampshire | ENSSSCP00035044706 | 99.7783 | 99.6674 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 94.6785 | 90.7982 | bos_taurus | ENSBTAP00000052354 | 94.5736 | 90.6977 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.6674 | 99.6674 | sus_scrofa_largewhite | ENSSSCP00025026571 | 99.6674 | 99.6674 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.7783 | 99.7783 | sus_scrofa_meishan | ENSSSCP00040026718 | 99.7783 | 99.7783 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.7783 | 99.6674 | sus_scrofa_berkshire | ENSSSCP00065047898 | 99.7783 | 99.6674 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 94.9002 | 91.2417 | ovis_aries_rambouillet | ENSOARP00020033015 | 94.7951 | 91.1406 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.7783 | 99.7783 | sus_scrofa_bamei | ENSSSCP00050037371 | 99.7783 | 99.7783 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.6674 | 99.6674 | sus_scrofa_tibetan | ENSSSCP00015024314 | 99.6674 | 99.6674 |
| ENSSSCG00030070089 | sus_scrofa_rongchang | ENSSSCP00030045194 | 99.5565 | 99.5565 | sus_scrofa_pietrain | ENSSSCP00055021164 | 99.5565 | 99.5565 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
