Description

Ensembl ID ENSSSCG00030067894 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 327167 bases Strand Minus strand
Position LUXR01091593.1 : 356251 - 683417 RNA binding domain AF-4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030043811 AF-4 PF05110 5.3e-166 1
ENSSSCP00030043743 AF-4 PF05110 6.7e-165 1
ENSSSCP00030043791 AF-4 PF05110 2.2e-141 1
ENSSSCP00030043791 AF-4 PF05110 2.2e-141 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00030094941 8199 1283aa ENSSSCP00030043743
- ENSSSCT00030095025 8124 1258aa ENSSSCP00030043791
- ENSSSCT00030095073 8225 1291aa ENSSSCP00030043811

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003001179154.81139.5189sus_scrofa_rongchangENSSSCP0003004381149.419135.6313
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003002327746.329532.3002sus_scrofa_rongchangENSSSCP0003004381143.996930.6739

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381195.429993.1836equus_caballusENSECAP0000002405794.55192.3254
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.8451sus_scrofa_landraceENSSSCP0004504272298.699398.6228
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.8451sus_scrofaENSSSCP0000003743498.699398.6228
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381163.129462.897sus_scrofa_usmarcENSSSCP0007000648199.269298.9038
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.9225sus_scrofa_wuzhishanENSSSCP0000502864498.699398.6993
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP00030043811100100sus_scrofa_jinhuaENSSSCP0006002767398.775898.7758
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.8451sus_scrofa_hampshireENSSSCP0003502836198.699398.6228
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381191.634489.0782bos_taurusENSBTAP0000005341593.149690.5512
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.7676sus_scrofa_largewhiteENSSSCP0002504125598.699398.5463
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.845199.8451sus_scrofa_meishanENSSSCP0004002900198.773998.7739
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.922599.8451sus_scrofa_berkshireENSSSCP0006500638798.699398.6228
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381191.324688.6909ovis_aries_rambouilletENSOARP0002001201480.808878.4784
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381168.938868.9388sus_scrofa_bameiENSSSCP0005000228199.887899.8878
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP0003004381199.225499.2254sus_scrofa_tibetanENSSSCP0001500729499.844199.8441
ENSSSCG00030067894sus_scrofa_rongchangENSSSCP00030043811100100sus_scrofa_pietrainENSSSCP0005500078598.775898.7758

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression