| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00030067723 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
100711 bases |
Strand |
Plus strand |
| Position |
LUXR01109355.1 : 2200229 - 2300939 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1e , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00030044187 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
1 |
| ENSSSCP00030044187 |
tRNA-synt_1g |
PF09334 |
3.2e-17 |
2 |
| ENSSSCP00030044187 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00030044187 |
tRNA-synt_1 |
PF00133 |
3.4e-41 |
4 |
| ENSSSCP00030044187 |
tRNA-synt_1 |
PF00133 |
3.4e-41 |
5 |
| ENSSSCP00030044187 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00030044274 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
1 |
| ENSSSCP00030044274 |
tRNA-synt_1g |
PF09334 |
3.3e-17 |
2 |
| ENSSSCP00030044274 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00030044274 |
tRNA-synt_1 |
PF00133 |
3.4e-41 |
4 |
| ENSSSCP00030044274 |
tRNA-synt_1 |
PF00133 |
3.4e-41 |
5 |
| ENSSSCP00030044274 |
Anticodon_1 |
PF08264 |
4.9e-11 |
6 |
| ENSSSCP00030044220 |
tRNA-synt_1g |
PF09334 |
3.6e-17 |
1 |
| ENSSSCP00030044220 |
tRNA-synt_1g |
PF09334 |
3.6e-17 |
2 |
| ENSSSCP00030044220 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00030044220 |
tRNA-synt_1 |
PF00133 |
3.8e-41 |
4 |
| ENSSSCP00030044220 |
tRNA-synt_1 |
PF00133 |
3.8e-41 |
5 |
| ENSSSCP00030044220 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00030044116 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
1 |
| ENSSSCP00030044116 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
2 |
| ENSSSCP00030044116 |
tRNA-synt_1e |
PF01406 |
1.3e-06 |
3 |
| ENSSSCP00030044116 |
tRNA-synt_1 |
PF00133 |
1.3e-36 |
4 |
| ENSSSCP00030044116 |
tRNA-synt_1 |
PF00133 |
1.3e-36 |
5 |
| ENSSSCP00030044116 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00030044199 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
1 |
| ENSSSCP00030044199 |
tRNA-synt_1g |
PF09334 |
3.7e-17 |
2 |
| ENSSSCP00030044199 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00030044199 |
tRNA-synt_1 |
PF00133 |
3.9e-41 |
4 |
| ENSSSCP00030044199 |
tRNA-synt_1 |
PF00133 |
3.9e-41 |
5 |
| ENSSSCP00030044199 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00030044248 |
tRNA-synt_1g |
PF09334 |
3.8e-17 |
1 |
| ENSSSCP00030044248 |
tRNA-synt_1g |
PF09334 |
3.8e-17 |
2 |
| ENSSSCP00030044248 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
3 |
| ENSSSCP00030044248 |
tRNA-synt_1 |
PF00133 |
4e-41 |
4 |
| ENSSSCP00030044248 |
tRNA-synt_1 |
PF00133 |
4e-41 |
5 |
| ENSSSCP00030044248 |
Anticodon_1 |
PF08264 |
1.1e-16 |
6 |
| ENSSSCP00030044135 |
tRNA-synt_1g |
PF09334 |
4e-17 |
1 |
| ENSSSCP00030044135 |
tRNA-synt_1g |
PF09334 |
4e-17 |
2 |
| ENSSSCP00030044135 |
tRNA-synt_1e |
PF01406 |
1.3e-06 |
3 |
| ENSSSCP00030044135 |
tRNA-synt_1 |
PF00133 |
4.7e-41 |
4 |
| ENSSSCP00030044135 |
tRNA-synt_1 |
PF00133 |
4.7e-41 |
5 |
| ENSSSCP00030044135 |
Anticodon_1 |
PF08264 |
1.2e-16 |
6 |
| ENSSSCP00030044169 |
tRNA-synt_1g |
PF09334 |
3.7e-13 |
1 |
| ENSSSCP00030044169 |
tRNA-synt_1e |
PF01406 |
1.2e-06 |
2 |
| ENSSSCP00030044169 |
tRNA-synt_1 |
PF00133 |
1.5e-33 |
3 |
| ENSSSCP00030044169 |
Anticodon_1 |
PF08264 |
1.1e-16 |
4 |
| ENSSSCP00030044359 |
tRNA-synt_1g |
PF09334 |
4.8e-07 |
1 |
| ENSSSCP00030044359 |
tRNA-synt_1 |
PF00133 |
1.3e-33 |
2 |
| ENSSSCP00030044359 |
tRNA-synt_1 |
PF00133 |
1.3e-33 |
3 |
| ENSSSCP00030044359 |
Anticodon_1 |
PF08264 |
5.2e-11 |
4 |
| ENSSSCP00030044317 |
tRNA-synt_1g |
PF09334 |
4.9e-07 |
1 |
| ENSSSCP00030044317 |
tRNA-synt_1 |
PF00133 |
1.3e-33 |
2 |
| ENSSSCP00030044317 |
tRNA-synt_1 |
PF00133 |
1.3e-33 |
3 |
| ENSSSCP00030044317 |
Anticodon_1 |
PF08264 |
5.2e-11 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00030095773 |
3958 |
1203aa |
ENSSSCP00030044116 |
| - |
ENSSSCT00030095803 |
4019 |
1245aa |
ENSSSCP00030044135 |
| - |
ENSSSCT00030095859 |
6509 |
1122aa |
ENSSSCP00030044169 |
| - |
ENSSSCT00030095890 |
6413 |
1144aa |
ENSSSCP00030044187 |
| - |
ENSSSCT00030095922 |
3999 |
1185aa |
ENSSSCP00030044199 |
| - |
ENSSSCT00030095964 |
4149 |
1175aa |
ENSSSCP00030044220 |
| - |
ENSSSCT00030096011 |
5456 |
1197aa |
ENSSSCP00030044248 |
| - |
ENSSSCT00030096056 |
6279 |
1144aa |
ENSSSCP00030044274 |
| - |
ENSSSCT00030096126 |
6285 |
1146aa |
ENSSSCP00030044317 |
| - |
ENSSSCT00030096218 |
6273 |
1142aa |
ENSSSCP00030044359 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030036316 | 22.9104 | 10.9701 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.6586 | 11.8072 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030045194 | 29.8226 | 13.8581 | sus_scrofa_rongchang | ENSSSCP00030044135 | 21.6064 | 10.0402 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030029517 | 25.3918 | 9.40439 | sus_scrofa_rongchang | ENSSSCP00030044135 | 19.5181 | 7.22892 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044609 | 28.8136 | 13.4652 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.5783 | 11.4859 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030030846 | 24.2472 | 11.3312 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.5783 | 11.4859 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030007128 | 30.9764 | 14.4781 | sus_scrofa_rongchang | ENSSSCP00030044135 | 14.7791 | 6.90763 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030029273 | 29.5858 | 12.9191 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.0964 | 10.5221 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 88.9157 | 84.498 | equus_caballus | ENSECAP00000090615 | 92.8691 | 88.255 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 99.9197 | 99.8394 | sus_scrofa_landrace | ENSSSCP00045038045 | 99.9197 | 99.8394 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 91.5663 | 90.6024 | sus_scrofa | ENSSSCP00000072832 | 97.0213 | 96 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 87.3896 | 86.506 | sus_scrofa_usmarc | ENSSSCP00070007040 | 96.8833 | 95.9038 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 88.2731 | 87.3896 | sus_scrofa_wuzhishan | ENSSSCP00005023874 | 95.3166 | 94.3625 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 96.7871 | 96.3855 | sus_scrofa_jinhua | ENSSSCP00060018257 | 97.7291 | 97.3236 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 91.6466 | 90.7631 | sus_scrofa_hampshire | ENSSSCP00035002767 | 95.8824 | 94.958 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 89.3976 | 85.0602 | bos_taurus | ENSBTAP00000008902 | 94.6429 | 90.051 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 91.6466 | 90.6827 | sus_scrofa_largewhite | ENSSSCP00025024463 | 95.8824 | 94.8739 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 98.2329 | 98.0723 | sus_scrofa_meishan | ENSSSCP00040000872 | 99.5928 | 99.43 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 96.7871 | 96.3052 | sus_scrofa_berkshire | ENSSSCP00065046360 | 97.7291 | 97.2425 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 89.3976 | 84.9799 | ovis_aries_rambouillet | ENSOARP00020028522 | 94.6429 | 89.966 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 89.3976 | 85.0602 | ovis_aries_rambouillet | ENSOARP00020026191 | 94.6429 | 90.051 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 96.8675 | 96.3855 | sus_scrofa_bamei | ENSSSCP00050017822 | 97.8102 | 97.3236 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 87.0683 | 85.4618 | sus_scrofa_tibetan | ENSSSCP00015015405 | 94.7552 | 93.007 |
| ENSSSCG00030067723 | sus_scrofa_rongchang | ENSSSCP00030044135 | 91.6466 | 90.8434 | sus_scrofa_pietrain | ENSSSCP00055044752 | 95.8824 | 95.042 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
