RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSSSCG00030062876	Gene ID		Accession	-
Symbol	MRPS17	Alias	-	Full Name	NA
Status	Confidence	Length	5374 bases	Strand	Minus strand
Position	LUXR01111694.1 : 3072251 - 3077624	RNA binding domain	Ribosomal_S17
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00030040653	Ribosomal_S17	PF00366	3.2e-17	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MRPS17-201	ENSSSCT00030087975	988	130aa	ENSSSCP00030040653

Gene Model

Click here to download ENSSSCG00030062876's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00030062876's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030062876

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	91.5385	89.2308	equus_caballus	ENSECAP00000010325	88.1481	85.9259
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	75.3846	70.7692	equus_caballus	ENSECAP00000082849	86.7257	81.4159
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_landrace	ENSSSCP00045036530	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa	ENSSSCP00000008277	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	99.2308	99.2308	sus_scrofa_usmarc	ENSSSCP00070009306	99.2308	99.2308
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_wuzhishan	ENSSSCP00005025442	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_jinhua	ENSSSCP00060016761	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_hampshire	ENSSSCP00035022445	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	93.8462	88.4615	bos_taurus	ENSBTAP00000069784	93.8462	88.4615
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	93.8462	87.6923	bos_taurus	ENSBTAP00000047871	93.8462	87.6923
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_largewhite	ENSSSCP00025021793	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_meishan	ENSSSCP00040006555	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_berkshire	ENSSSCP00065041866	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	93.8462	87.6923	ovis_aries_rambouillet	ENSOARP00020032072	93.8462	87.6923
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_bamei	ENSSSCP00050040290	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_tibetan	ENSSSCP00015026597	100	100
ENSSSCG00030062876	sus_scrofa_rongchang	ENSSSCP00030040653	100	100	sus_scrofa_pietrain	ENSSSCP00055045772	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression