Description

Ensembl ID ENSSSCG00030059173 Gene ID 100523112 Accession -
Symbol EXOSC2 Alias - Full Name exosome component 2
Status Confidence Length 9580 bases Strand Plus strand
Position LUXR01096832.1 : 1720732 - 1730311 RNA binding domain ECR1_N , KH_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030037965 ECR1_N PF14382 4.3e-15 1
ENSSSCP00030037965 KH_6 PF15985 2.2e-12 2
ENSSSCP00030038000 ECR1_N PF14382 4.4e-15 1
ENSSSCP00030038000 KH_6 PF15985 2.3e-12 2
ENSSSCP00030037947 ECR1_N PF14382 5e-15 1
ENSSSCP00030037947 KH_6 PF15985 2.7e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EXOSC2-201 ENSSSCT00030082606 1390 293aa ENSSSCP00030037947
EXOSC2-202 ENSSSCT00030082636 1300 263aa ENSSSCP00030037965
EXOSC2-203 ENSSSCT00030082700 1720 267aa ENSSSCP00030038000

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003002376634.181818.1818sus_scrofa_rongchangENSSSCP0003003794732.081917.0648

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794794.539290.785equus_caballusENSECAP0000003186591.118487.5
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_landraceENSSSCP00045014748100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794794.19892.1502sus_scrofaENSSSCP0000006813691.390789.404
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_usmarcENSSSCP00070013265100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_wuzhishanENSSSCP00005000217100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_jinhuaENSSSCP00060016178100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_hampshireENSSSCP00035048021100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794799.317496.9283bos_taurusENSBTAP0000007041199.317496.9283
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP00030037947100100sus_scrofa_largewhiteENSSSCP00025005784100100
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794791.467691.1263sus_scrofa_meishanENSSSCP0004002508898.89398.524
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794791.467691.1263sus_scrofa_berkshireENSSSCP0006504373998.89398.524
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794799.658797.2696ovis_aries_rambouilletENSOARP0002000165199.658797.2696
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794791.467691.1263sus_scrofa_bameiENSSSCP0005001024998.89398.524
ENSSSCG00030059173sus_scrofa_rongchangENSSSCP0003003794793.856792.1502sus_scrofa_pietrainENSSSCP0005500201493.537491.8367

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression