RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00030059173 | Gene ID |
100523112 |
Accession |
- |
Symbol |
EXOSC2 |
Alias |
- |
Full Name |
exosome component 2 |
Status |
Confidence |
Length |
9580 bases |
Strand |
Plus strand |
Position |
LUXR01096832.1 : 1720732 - 1730311 |
RNA binding domain |
ECR1_N , KH_6 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00030037965 |
ECR1_N |
PF14382 |
4.3e-15 |
1 |
ENSSSCP00030037965 |
KH_6 |
PF15985 |
2.2e-12 |
2 |
ENSSSCP00030038000 |
ECR1_N |
PF14382 |
4.4e-15 |
1 |
ENSSSCP00030038000 |
KH_6 |
PF15985 |
2.3e-12 |
2 |
ENSSSCP00030037947 |
ECR1_N |
PF14382 |
5e-15 |
1 |
ENSSSCP00030037947 |
KH_6 |
PF15985 |
2.7e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
EXOSC2-201 |
ENSSSCT00030082606 |
1390 |
293aa |
ENSSSCP00030037947 |
EXOSC2-202 |
ENSSSCT00030082636 |
1300 |
263aa |
ENSSSCP00030037965 |
EXOSC2-203 |
ENSSSCT00030082700 |
1720 |
267aa |
ENSSSCP00030038000 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030023766 | 34.1818 | 18.1818 | sus_scrofa_rongchang | ENSSSCP00030037947 | 32.0819 | 17.0648 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 94.5392 | 90.785 | equus_caballus | ENSECAP00000031865 | 91.1184 | 87.5 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045014748 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 94.198 | 92.1502 | sus_scrofa | ENSSSCP00000068136 | 91.3907 | 89.404 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070013265 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005000217 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060016178 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035048021 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 99.3174 | 96.9283 | bos_taurus | ENSBTAP00000070411 | 99.3174 | 96.9283 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025005784 | 100 | 100 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 91.4676 | 91.1263 | sus_scrofa_meishan | ENSSSCP00040025088 | 98.893 | 98.524 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 91.4676 | 91.1263 | sus_scrofa_berkshire | ENSSSCP00065043739 | 98.893 | 98.524 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 99.6587 | 97.2696 | ovis_aries_rambouillet | ENSOARP00020001651 | 99.6587 | 97.2696 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 91.4676 | 91.1263 | sus_scrofa_bamei | ENSSSCP00050010249 | 98.893 | 98.524 |
ENSSSCG00030059173 | sus_scrofa_rongchang | ENSSSCP00030037947 | 93.8567 | 92.1502 | sus_scrofa_pietrain | ENSSSCP00055002014 | 93.5374 | 91.8367 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |