| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00030056824 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
13621 bases |
Strand |
Plus strand |
| Position |
LUXR01078939.1 : 374403 - 388023 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00030036303 |
tRNA-synt_1g |
PF09334 |
2.1e-10 |
1 |
| ENSSSCP00030036303 |
tRNA-synt_1 |
PF00133 |
9.1e-203 |
2 |
| ENSSSCP00030036303 |
Anticodon_1 |
PF08264 |
1.1e-32 |
3 |
| ENSSSCP00030036359 |
tRNA-synt_1g |
PF09334 |
2.4e-10 |
1 |
| ENSSSCP00030036359 |
tRNA-synt_1 |
PF00133 |
9.9e-203 |
2 |
| ENSSSCP00030036359 |
Anticodon_1 |
PF08264 |
1.2e-32 |
3 |
| ENSSSCP00030036316 |
tRNA-synt_1g |
PF09334 |
2.8e-10 |
1 |
| ENSSSCP00030036316 |
tRNA-synt_1 |
PF00133 |
1.1e-202 |
2 |
| ENSSSCP00030036316 |
Anticodon_1 |
PF08264 |
1.2e-32 |
3 |
| ENSSSCP00030036443 |
tRNA-synt_1g |
PF09334 |
3.8e-10 |
1 |
| ENSSSCP00030036443 |
tRNA-synt_1 |
PF00133 |
6.5e-203 |
2 |
| ENSSSCP00030036443 |
Anticodon_1 |
PF08264 |
4.7e-27 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00030079267 |
4297 |
1265aa |
ENSSSCP00030036303 |
| - |
ENSSSCT00030079298 |
4432 |
1340aa |
ENSSSCP00030036316 |
| - |
ENSSSCT00030079391 |
4297 |
1295aa |
ENSSSCP00030036359 |
| - |
ENSSSCT00030079605 |
3726 |
1241aa |
ENSSSCP00030036443 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030045194 | 31.7073 | 17.2949 | sus_scrofa_rongchang | ENSSSCP00030036316 | 21.3433 | 11.6418 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030029517 | 27.0637 | 12.6437 | sus_scrofa_rongchang | ENSSSCP00030036316 | 19.3284 | 9.02985 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.6586 | 11.8072 | sus_scrofa_rongchang | ENSSSCP00030036316 | 22.9104 | 10.9701 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030044609 | 63.7476 | 49.6234 | sus_scrofa_rongchang | ENSSSCP00030036316 | 50.5224 | 39.3284 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030030846 | 24.3265 | 13.1537 | sus_scrofa_rongchang | ENSSSCP00030036316 | 22.9104 | 12.3881 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030007128 | 35.1852 | 19.3603 | sus_scrofa_rongchang | ENSSSCP00030036316 | 15.597 | 8.58209 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030029273 | 37.1795 | 21.9921 | sus_scrofa_rongchang | ENSSSCP00030036316 | 28.1343 | 16.6418 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 91.194 | 88.7313 | equus_caballus | ENSECAP00000013051 | 96.6008 | 93.9921 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 99.7015 | 99.7015 | sus_scrofa_landrace | ENSSSCP00045048987 | 99.7015 | 99.7015 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 89.403 | 89.0299 | sus_scrofa | ENSSSCP00000058218 | 96.8472 | 96.443 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 94.2537 | 94.0299 | sus_scrofa_usmarc | ENSSSCP00070039596 | 96.6335 | 96.404 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 89.403 | 89.3284 | sus_scrofa_wuzhishan | ENSSSCP00005040629 | 95.9936 | 95.9135 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.9104 | 92.7612 | sus_scrofa_jinhua | ENSSSCP00060037139 | 98.419 | 98.2609 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 94.7015 | 94.6269 | sus_scrofa_hampshire | ENSSSCP00035008644 | 99.2181 | 99.14 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 91.5672 | 89.5522 | bos_taurus | ENSBTAP00000007404 | 97.0728 | 94.9367 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.8358 | 92.7612 | sus_scrofa_largewhite | ENSSSCP00025046908 | 98.3399 | 98.2609 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.9104 | 92.8358 | sus_scrofa_meishan | ENSSSCP00040027367 | 98.419 | 98.3399 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.8358 | 92.6866 | sus_scrofa_berkshire | ENSSSCP00065026837 | 98.3399 | 98.1818 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 91.3433 | 89.3284 | ovis_aries_rambouillet | ENSOARP00020016132 | 96.8354 | 94.6994 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.8358 | 92.7612 | sus_scrofa_bamei | ENSSSCP00050006837 | 98.3399 | 98.2609 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 92.8358 | 92.7612 | sus_scrofa_tibetan | ENSSSCP00015047081 | 98.3399 | 98.2609 |
| ENSSSCG00030056824 | sus_scrofa_rongchang | ENSSSCP00030036316 | 99.8507 | 99.8507 | sus_scrofa_pietrain | ENSSSCP00055045562 | 99.8507 | 99.8507 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
