RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00030049486	Gene ID		Accession	-
Symbol	RPL15	Alias	-	Full Name	NA
Status	Confidence	Length	3967 bases	Strand	Minus strand
Position	LUXR01045070.1 : 127080 - 131046	RNA binding domain	Ribosomal_L15e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00030031520	Ribosomal_L15e	PF00827	9.5e-92	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPL15-201	ENSSSCT00030069014	2577	204aa	ENSSSCP00030031520

Gene Model

Click here to download ENSSSCG00030049486's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00030049486's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030049486

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	100	100	sus_scrofa_landrace	ENSSSCP00045047891	100	100
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	44.1176	37.2549	sus_scrofa_usmarc	ENSSSCP00070017527	62.9371	53.1469
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	45.5882	39.7059	sus_scrofa_jinhua	ENSSSCP00060008079	66.4286	57.8571
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	100	100	sus_scrofa_jinhua	ENSSSCP00060025585	100	100
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	45.5882	39.7059	sus_scrofa_meishan	ENSSSCP00040048085	66.4286	57.8571
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	100	100	sus_scrofa_meishan	ENSSSCP00040019520	100	100
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	100	100	sus_scrofa_bamei	ENSSSCP00050028504	100	100
ENSSSCG00030049486	sus_scrofa_rongchang	ENSSSCP00030031520	100	100	sus_scrofa_tibetan	ENSSSCP00015031973	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression