RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00030047864 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
322371 bases |
Strand |
Minus strand |
Position |
LUXR01090049.1 : 320107 - 642477 |
RNA binding domain |
DcpS_C |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00030030675 |
DcpS_C |
PF11969 |
1.1e-34 |
1 |
ENSSSCP00030030752 |
DcpS_C |
PF11969 |
1.2e-34 |
1 |
ENSSSCP00030030655 |
DcpS_C |
PF11969 |
1.4e-34 |
1 |
ENSSSCP00030030700 |
DcpS_C |
PF11969 |
1.4e-34 |
1 |
ENSSSCP00030030732 |
DcpS_C |
PF11969 |
1.4e-34 |
1 |
ENSSSCP00030030721 |
DcpS_C |
PF11969 |
1.5e-34 |
1 |
ENSSSCP00030030744 |
DcpS_C |
PF11969 |
4.5e-34 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00030066892 |
2692 |
342aa |
ENSSSCP00030030655 |
- |
ENSSSCT00030066940 |
2442 |
288aa |
ENSSSCP00030030675 |
- |
ENSSSCT00030067031 |
2854 |
342aa |
ENSSSCP00030030700 |
- |
ENSSSCT00030067076 |
2634 |
356aa |
ENSSSCP00030030721 |
- |
ENSSSCT00030067095 |
2007 |
344aa |
ENSSSCP00030030732 |
- |
ENSSSCT00030067128 |
1141 |
336aa |
ENSSSCP00030030744 |
- |
ENSSSCT00030067147 |
945 |
306aa |
ENSSSCP00030030752 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030034198 | 46.7033 | 21.978 | sus_scrofa_rongchang | ENSSSCP00030030721 | 23.8764 | 11.236 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 91.8539 | 85.3933 | equus_caballus | ENSECAP00000034186 | 95.614 | 88.8889 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 96.9101 | 96.6292 | sus_scrofa_landrace | ENSSSCP00045000583 | 97.1831 | 96.9014 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.7191 | 99.7191 | sus_scrofa | ENSSSCP00000053859 | 99.7191 | 99.7191 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 98.0337 | 98.0337 | sus_scrofa_usmarc | ENSSSCP00070030477 | 96.6759 | 96.6759 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.7191 | 99.4382 | sus_scrofa_wuzhishan | ENSSSCP00005008381 | 99.7191 | 99.4382 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060044955 | 100 | 100 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.7191 | 99.4382 | sus_scrofa_hampshire | ENSSSCP00035001193 | 99.7191 | 99.4382 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 88.764 | 84.2697 | bos_taurus | ENSBTAP00000066152 | 88.0223 | 83.5655 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.4382 | 99.4382 | sus_scrofa_largewhite | ENSSSCP00025039629 | 99.4382 | 99.4382 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040014587 | 100 | 100 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.7191 | 99.7191 | sus_scrofa_berkshire | ENSSSCP00065017696 | 99.7191 | 99.7191 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 91.8539 | 88.2022 | ovis_aries_rambouillet | ENSOARP00020014277 | 92.1127 | 88.4507 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.4382 | 99.1573 | sus_scrofa_bamei | ENSSSCP00050031859 | 99.4382 | 99.1573 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 96.9101 | 96.6292 | sus_scrofa_tibetan | ENSSSCP00015027878 | 97.1831 | 96.9014 |
ENSSSCG00030047864 | sus_scrofa_rongchang | ENSSSCP00030030721 | 99.7191 | 99.4382 | sus_scrofa_pietrain | ENSSSCP00055020832 | 99.7191 | 99.4382 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |