Description

Ensembl ID ENSSSCG00030047864 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 322371 bases Strand Minus strand
Position LUXR01090049.1 : 320107 - 642477 RNA binding domain DcpS_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030030675 DcpS_C PF11969 1.1e-34 1
ENSSSCP00030030752 DcpS_C PF11969 1.2e-34 1
ENSSSCP00030030655 DcpS_C PF11969 1.4e-34 1
ENSSSCP00030030700 DcpS_C PF11969 1.4e-34 1
ENSSSCP00030030732 DcpS_C PF11969 1.4e-34 1
ENSSSCP00030030721 DcpS_C PF11969 1.5e-34 1
ENSSSCP00030030744 DcpS_C PF11969 4.5e-34 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00030066892 2692 342aa ENSSSCP00030030655
- ENSSSCT00030066940 2442 288aa ENSSSCP00030030675
- ENSSSCT00030067031 2854 342aa ENSSSCP00030030700
- ENSSSCT00030067076 2634 356aa ENSSSCP00030030721
- ENSSSCT00030067095 2007 344aa ENSSSCP00030030732
- ENSSSCT00030067128 1141 336aa ENSSSCP00030030744
- ENSSSCT00030067147 945 306aa ENSSSCP00030030752

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003419846.703321.978sus_scrofa_rongchangENSSSCP0003003072123.876411.236

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072191.853985.3933equus_caballusENSECAP0000003418695.61488.8889
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072196.910196.6292sus_scrofa_landraceENSSSCP0004500058397.183196.9014
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.719199.7191sus_scrofaENSSSCP0000005385999.719199.7191
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072198.033798.0337sus_scrofa_usmarcENSSSCP0007003047796.675996.6759
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.719199.4382sus_scrofa_wuzhishanENSSSCP0000500838199.719199.4382
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP00030030721100100sus_scrofa_jinhuaENSSSCP00060044955100100
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.719199.4382sus_scrofa_hampshireENSSSCP0003500119399.719199.4382
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072188.76484.2697bos_taurusENSBTAP0000006615288.022383.5655
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.438299.4382sus_scrofa_largewhiteENSSSCP0002503962999.438299.4382
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP00030030721100100sus_scrofa_meishanENSSSCP00040014587100100
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.719199.7191sus_scrofa_berkshireENSSSCP0006501769699.719199.7191
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072191.853988.2022ovis_aries_rambouilletENSOARP0002001427792.112788.4507
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.438299.1573sus_scrofa_bameiENSSSCP0005003185999.438299.1573
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072196.910196.6292sus_scrofa_tibetanENSSSCP0001502787897.183196.9014
ENSSSCG00030047864sus_scrofa_rongchangENSSSCP0003003072199.719199.4382sus_scrofa_pietrainENSSSCP0005502083299.719199.4382

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression