| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00030045796 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
52514 bases |
Strand |
Plus strand |
| Position |
LUXR01071810.1 : 4094794 - 4147307 |
RNA binding domain |
tRNA-synt_1g , tRNA-synt_1 , Anticodon_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00030029297 |
tRNA-synt_1g |
PF09334 |
2.7e-25 |
1 |
| ENSSSCP00030029297 |
tRNA-synt_1g |
PF09334 |
2.7e-25 |
2 |
| ENSSSCP00030029297 |
tRNA-synt_1 |
PF00133 |
7.3e-160 |
3 |
| ENSSSCP00030029297 |
tRNA-synt_1 |
PF00133 |
7.3e-160 |
4 |
| ENSSSCP00030029297 |
Anticodon_1 |
PF08264 |
6e-26 |
5 |
| ENSSSCP00030029273 |
tRNA-synt_1g |
PF09334 |
1.9e-23 |
1 |
| ENSSSCP00030029273 |
tRNA-synt_1 |
PF00133 |
2.9e-167 |
2 |
| ENSSSCP00030029273 |
Anticodon_1 |
PF08264 |
6.4e-26 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00030063938 |
3604 |
1014aa |
ENSSSCP00030029273 |
| - |
ENSSSCT00030064000 |
3588 |
972aa |
ENSSSCP00030029297 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030036316 | 28.1343 | 16.6418 | sus_scrofa_rongchang | ENSSSCP00030029273 | 37.1795 | 21.9921 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030045194 | 27.7162 | 14.6341 | sus_scrofa_rongchang | ENSSSCP00030029273 | 24.6548 | 13.0178 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029517 | 24.3469 | 10.6583 | sus_scrofa_rongchang | ENSSSCP00030029273 | 22.9783 | 10.0592 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030044135 | 24.0964 | 10.5221 | sus_scrofa_rongchang | ENSSSCP00030029273 | 29.5858 | 12.9191 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030044609 | 32.8625 | 19.5857 | sus_scrofa_rongchang | ENSSSCP00030029273 | 34.4181 | 20.5128 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030030846 | 26.5452 | 15.0555 | sus_scrofa_rongchang | ENSSSCP00030029273 | 33.0375 | 18.7377 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030007128 | 34.1751 | 18.8552 | sus_scrofa_rongchang | ENSSSCP00030029273 | 20.0197 | 11.0454 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 94.0828 | 88.3629 | equus_caballus | ENSECAP00000041874 | 94.2688 | 88.5376 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 94.2801 | 93.1953 | sus_scrofa_landrace | ENSSSCP00045040843 | 97.7505 | 96.6258 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.5207 | 97.8304 | sus_scrofa | ENSSSCP00000069528 | 98.7154 | 98.0237 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.3235 | 97.6331 | sus_scrofa_usmarc | ENSSSCP00070017647 | 98.6152 | 97.9229 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 42.1105 | 29.2899 | sus_scrofa_wuzhishan | ENSSSCP00005009258 | 54.3949 | 37.8344 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 85.7002 | 84.9112 | sus_scrofa_wuzhishan | ENSSSCP00005017628 | 89.5876 | 88.7629 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 96.3511 | 94.3787 | sus_scrofa_jinhua | ENSSSCP00060027744 | 96.3511 | 94.3787 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.5207 | 97.8304 | sus_scrofa_hampshire | ENSSSCP00035022334 | 98.7154 | 98.0237 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 94.0828 | 89.3491 | bos_taurus | ENSBTAP00000053447 | 94.2688 | 89.5257 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 95.069 | 94.1815 | sus_scrofa_largewhite | ENSSSCP00025008847 | 96.4965 | 95.5956 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.5207 | 97.8304 | sus_scrofa_meishan | ENSSSCP00040033986 | 98.7154 | 98.0237 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.5207 | 97.8304 | sus_scrofa_berkshire | ENSSSCP00065012329 | 98.7154 | 98.0237 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 93.9842 | 89.7436 | ovis_aries_rambouillet | ENSOARP00020011478 | 94.17 | 89.921 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.4221 | 97.7318 | sus_scrofa_bamei | ENSSSCP00050035118 | 98.6166 | 97.9249 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 94.9704 | 94.2801 | sus_scrofa_tibetan | ENSSSCP00015028761 | 95.1581 | 94.4664 |
| ENSSSCG00030045796 | sus_scrofa_rongchang | ENSSSCP00030029273 | 98.4221 | 97.7318 | sus_scrofa_pietrain | ENSSSCP00055012344 | 98.6166 | 97.9249 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
