Description

Ensembl ID ENSSSCG00030044790 Gene ID 100151875 Accession -
Symbol Alias - Full Name PYM homolog 1, exon junction complex associated factor
Status Confidence Length 21305 bases Strand Minus strand
Position LUXR01082517.1 : 265254 - 286558 RNA binding domain Mago-bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030028591 Mago-bind PF09282 6.1e-13 1
ENSSSCP00030028584 Mago-bind PF09282 6.2e-13 1
ENSSSCP00030028601 Mago-bind PF09282 1e-12 1
ENSSSCP00030028611 Mago-bind PF09282 1e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00030062505 2161 242aa ENSSSCP00030028584
- ENSSSCT00030062523 1809 198aa ENSSSCP00030028591
- ENSSSCT00030062543 1461 218aa ENSSSCP00030028601
- ENSSSCT00030062569 1265 266aa ENSSSCP00030028611

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030044790

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861177.443673.3083equus_caballusENSECAP0000006776971.77767.9443
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofa_landraceENSSSCP0004504175099.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofaENSSSCP0000005308499.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861173.684272.5564sus_scrofa_usmarcENSSSCP0007005103590.322688.9401
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP00030028611100100sus_scrofa_wuzhishanENSSSCP00005012699100100
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP00030028611100100sus_scrofa_jinhuaENSSSCP00060042141100100
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861196.240696.2406sus_scrofa_hampshireENSSSCP00035012874100100
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861169.924869.1729bos_taurusENSBTAP0000004158891.625690.6404
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofa_largewhiteENSSSCP0002502306799.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofa_meishanENSSSCP0004000092199.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofa_berkshireENSSSCP0006502724799.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861170.300868.797ovis_aries_rambouilletENSOARP0002000690192.118290.1478
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP00030028611100100sus_scrofa_bameiENSSSCP00050045691100100
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861199.624199.6241sus_scrofa_tibetanENSSSCP0001502829799.624199.6241
ENSSSCG00030044790sus_scrofa_rongchangENSSSCP0003002861195.864795.8647sus_scrofa_pietrainENSSSCP0005501720599.609499.6094

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression