| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00030042978 | Gene ID |
100516319 |
Accession |
- |
| Symbol |
STAU2 |
Alias |
- |
Full Name |
staufen double-stranded RNA binding protein 2 |
| Status |
Confidence |
Length |
316901 bases |
Strand |
Plus strand |
| Position |
LUXR01042396.1 : 2399927 - 2716827 |
RNA binding domain |
dsrm , Staufen_C |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00030027660 |
dsrm |
PF00035 |
1.1e-46 |
1 |
| ENSSSCP00030027660 |
dsrm |
PF00035 |
1.1e-46 |
2 |
| ENSSSCP00030027660 |
dsrm |
PF00035 |
1.1e-46 |
3 |
| ENSSSCP00030027660 |
Staufen_C |
PF16482 |
2.4e-43 |
4 |
| ENSSSCP00030027716 |
dsrm |
PF00035 |
9.7e-46 |
1 |
| ENSSSCP00030027716 |
dsrm |
PF00035 |
9.7e-46 |
2 |
| ENSSSCP00030027716 |
dsrm |
PF00035 |
9.7e-46 |
3 |
| ENSSSCP00030027716 |
dsrm |
PF00035 |
9.7e-46 |
4 |
| ENSSSCP00030027716 |
Staufen_C |
PF16482 |
9.3e-19 |
5 |
| ENSSSCP00030027746 |
dsrm |
PF00035 |
1.2e-45 |
1 |
| ENSSSCP00030027746 |
dsrm |
PF00035 |
1.2e-45 |
2 |
| ENSSSCP00030027746 |
dsrm |
PF00035 |
1.2e-45 |
3 |
| ENSSSCP00030027746 |
Staufen_C |
PF16482 |
1.1e-18 |
4 |
| ENSSSCP00030027549 |
dsrm |
PF00035 |
3.3e-39 |
1 |
| ENSSSCP00030027549 |
dsrm |
PF00035 |
3.3e-39 |
2 |
| ENSSSCP00030027549 |
dsrm |
PF00035 |
3.3e-39 |
3 |
| ENSSSCP00030027549 |
Staufen_C |
PF16482 |
4.9e-19 |
4 |
| ENSSSCP00030027583 |
dsrm |
PF00035 |
4.5e-39 |
1 |
| ENSSSCP00030027583 |
dsrm |
PF00035 |
4.5e-39 |
2 |
| ENSSSCP00030027583 |
dsrm |
PF00035 |
4.5e-39 |
3 |
| ENSSSCP00030027583 |
Staufen_C |
PF16482 |
8.1e-19 |
4 |
| ENSSSCP00030027671 |
dsrm |
PF00035 |
8.9e-39 |
1 |
| ENSSSCP00030027671 |
dsrm |
PF00035 |
8.9e-39 |
2 |
| ENSSSCP00030027671 |
dsrm |
PF00035 |
8.9e-39 |
3 |
| ENSSSCP00030027671 |
Staufen_C |
PF16482 |
4.7e-19 |
4 |
| ENSSSCP00030027775 |
dsrm |
PF00035 |
2.6e-36 |
1 |
| ENSSSCP00030027775 |
dsrm |
PF00035 |
2.6e-36 |
2 |
| ENSSSCP00030027775 |
dsrm |
PF00035 |
2.6e-36 |
3 |
| ENSSSCP00030027775 |
Staufen_C |
PF16482 |
4.2e-19 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| STAU2-201 |
ENSSSCT00030060178 |
3983 |
475aa |
ENSSSCP00030027549 |
| STAU2-202 |
ENSSSCT00030060246 |
8210 |
491aa |
ENSSSCP00030027583 |
| STAU2-204 |
ENSSSCT00030060397 |
3175 |
632aa |
ENSSSCP00030027660 |
| STAU2-203 |
ENSSSCT00030060416 |
8328 |
479aa |
ENSSSCP00030027671 |
| STAU2-205 |
ENSSSCT00030060507 |
4395 |
511aa |
ENSSSCP00030027716 |
| STAU2-206 |
ENSSSCT00030060573 |
4226 |
534aa |
ENSSSCP00030027746 |
| STAU2-207 |
ENSSSCT00030060640 |
8138 |
467aa |
ENSSSCP00030027775 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030016720 | 5.27449 | 2.04521 | sus_scrofa_rongchang | ENSSSCP00030027660 | 7.75316 | 3.00633 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030044183 | 19.2374 | 8.66551 | sus_scrofa_rongchang | ENSSSCP00030027660 | 17.5633 | 7.91139 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030002752 | 34.1853 | 20.7668 | sus_scrofa_rongchang | ENSSSCP00030027660 | 16.9304 | 10.2848 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030009194 | 13.3333 | 6.96517 | sus_scrofa_rongchang | ENSSSCP00030027660 | 21.2025 | 11.0759 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030028426 | 7.07965 | 2.80236 | sus_scrofa_rongchang | ENSSSCP00030027660 | 7.59494 | 3.00633 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030040871 | 20.8406 | 11.0333 | sus_scrofa_rongchang | ENSSSCP00030027660 | 18.8291 | 9.96835 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030046547 | 15.087 | 6.76983 | sus_scrofa_rongchang | ENSSSCP00030027660 | 12.3418 | 5.53797 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030017165 | 31.4208 | 18.8525 | sus_scrofa_rongchang | ENSSSCP00030027660 | 18.1962 | 10.9177 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030007975 | 20.7426 | 10.7554 | sus_scrofa_rongchang | ENSSSCP00030027660 | 25.6329 | 13.2911 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030001909 | 61.2809 | 48.3261 | sus_scrofa_rongchang | ENSSSCP00030027660 | 66.6139 | 52.5316 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030018834 | 12.6747 | 5.5918 | sus_scrofa_rongchang | ENSSSCP00030027660 | 21.519 | 9.49367 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030037347 | 12.9114 | 5.06329 | sus_scrofa_rongchang | ENSSSCP00030027660 | 8.06962 | 3.16456 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030043081 | 18.4458 | 8.96669 | sus_scrofa_rongchang | ENSSSCP00030027660 | 34.1772 | 16.6139 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030046579 | 21.3896 | 11.7166 | sus_scrofa_rongchang | ENSSSCP00030027660 | 24.8418 | 13.6076 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 97.943 | 96.519 | equus_caballus | ENSECAP00000054411 | 98.8818 | 97.4441 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045014054 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa | ENSSSCP00000039405 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 99.2089 | 99.2089 | sus_scrofa_usmarc | ENSSSCP00070029699 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 98.8924 | 97.7848 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060012438 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035017860 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 94.7785 | 93.9873 | bos_taurus | ENSBTAP00000066503 | 98.5197 | 97.6974 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025032178 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040041535 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065007336 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 98.2595 | 97.1519 | ovis_aries_rambouillet | ENSOARP00020016781 | 96.2791 | 95.1938 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 17.4051 | 16.9304 | ovis_aries_rambouillet | ENSOARP00020018085 | 92.437 | 89.916 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050025440 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 99.2089 | 99.2089 | sus_scrofa_tibetan | ENSSSCP00015031265 | 100 | 100 |
| ENSSSCG00030042978 | sus_scrofa_rongchang | ENSSSCP00030027660 | 99.2089 | 99.2089 | sus_scrofa_pietrain | ENSSSCP00055041822 | 100 | 100 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
