RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00030042414	Gene ID		Accession	-
Symbol	RPL37	Alias	-	Full Name	NA
Status	Confidence	Length	6425 bases	Strand	Minus strand
Position	LUXR01057065.1 : 3740606 - 3747030	RNA binding domain	Ribosomal_L37e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00030026963	Ribosomal_L37e	PF01907	1.8e-26	1
ENSSSCP00030026969	Ribosomal_L37e	PF01907	1.9e-26	1
ENSSSCP00030026955	Ribosomal_L37e	PF01907	2.5e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPL37-201	ENSSSCT00030059035	5548	87aa	ENSSSCP00030026955
RPL37-202	ENSSSCT00030059047	4160	97aa	ENSSSCP00030026963
RPL37-203	ENSSSCT00030059055	654	100aa	ENSSSCP00030026969

Gene Model

Click here to download ENSSSCG00030042414's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00030042414's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030000425	66.6667	60	sus_scrofa_rongchang	ENSSSCP00030026969	50	45

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	96	96	equus_caballus	ENSECAP00000051430	98.9691	98.9691
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	64	54	equus_caballus	ENSECAP00000032066	62.1359	52.4272
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_landrace	ENSSSCP00045005918	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	96	96	sus_scrofa	ENSSSCP00000048476	98.9691	98.9691
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_usmarc	ENSSSCP00070009284	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_wuzhishan	ENSSSCP00005024859	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_jinhua	ENSSSCP00060003498	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	94	94	bos_taurus	ENSBTAP00000049176	96.9072	96.9072
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	96	96	bos_taurus	ENSBTAP00000006781	98.9691	98.9691
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	64	61	bos_taurus	ENSBTAP00000052386	84.2105	80.2632
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_largewhite	ENSSSCP00025033674	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_meishan	ENSSSCP00040008870	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_berkshire	ENSSSCP00065035683	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	96	96	ovis_aries_rambouillet	ENSOARP00020010110	98.9691	98.9691
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_tibetan	ENSSSCP00015037079	100	100
ENSSSCG00030042414	sus_scrofa_rongchang	ENSSSCP00030026969	100	100	sus_scrofa_pietrain	ENSSSCP00055011923	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression