RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00030028261	Gene ID		Accession	-
Symbol	FBLL1	Alias	-	Full Name	NA
Status	Confidence	Length	999 bases	Strand	Plus strand
Position	LUXR01043324.1 : 65163 - 66161	RNA binding domain	Fibrillarin
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00030018176	Fibrillarin	PF01269	3.7e-106	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
FBLL1-201	ENSSSCT00030039500	999	332aa	ENSSSCP00030018176

Gene Model

Click here to download ENSSSCG00030028261's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00030028261's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030044140	85.0932	78.2609	sus_scrofa_rongchang	ENSSSCP00030018176	82.5301	75.9036

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa_landrace	ENSSSCP00045000245	100	100
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa	ENSSSCP00000018025	100	100
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	99.3976	99.0964	sus_scrofa_usmarc	ENSSSCP00070023698	99.0991	98.7988
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	62.0482	61.4458	sus_scrofa_wuzhishan	ENSSSCP00005008668	99.5169	98.5507
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	80.7229	79.8193	bos_taurus	ENSBTAP00000054113	91.1565	90.1361
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa_meishan	ENSSSCP00040035302	100	100
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa_berkshire	ENSSSCP00065003103	100	100
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	93.0723	92.1687	ovis_aries_rambouillet	ENSOARP00020020095	93.0723	92.1687
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa_bamei	ENSSSCP00050001737	100	100
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	96.6867	96.6867	sus_scrofa_tibetan	ENSSSCP00015047114	96.6867	96.6867
ENSSSCG00030028261	sus_scrofa_rongchang	ENSSSCP00030018176	100	100	sus_scrofa_pietrain	ENSSSCP00055034485	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression