Description

Ensembl ID ENSSSCG00030020005 Gene ID Accession -
Symbol POLR3A Alias - Full Name NA
Status Confidence Length 61451 bases Strand Minus strand
Position LUXR01023213.1 : 634783 - 696233 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030012373 RNA_pol_Rpb1_4 PF05000 7.3e-32 1
ENSSSCP00030012373 RNA_pol_Rpb1_1 PF04997 2.4e-60 2
ENSSSCP00030012373 RNA_pol_Rpb1_5 PF04998 6.3e-89 3
ENSSSCP00030012373 RNA_pol_Rpb1_2 PF00623 6.9e-75 4
ENSSSCP00030012373 RNA_pol_Rpb1_3 PF04983 7.4e-42 5
ENSSSCP00030012368 RNA_pol_Rpb1_4 PF05000 7.3e-32 1
ENSSSCP00030012368 RNA_pol_Rpb1_1 PF04997 2.1e-96 2
ENSSSCP00030012368 RNA_pol_Rpb1_5 PF04998 6.6e-55 3
ENSSSCP00030012368 RNA_pol_Rpb1_5 PF04998 6.6e-55 4
ENSSSCP00030012368 RNA_pol_Rpb1_2 PF00623 3.9e-47 5
ENSSSCP00030012368 RNA_pol_Rpb1_2 PF00623 3.9e-47 6
ENSSSCP00030012368 RNA_pol_Rpb1_3 PF04983 6.6e-42 7
ENSSSCP00030012336 RNA_pol_Rpb1_4 PF05000 8e-32 1
ENSSSCP00030012336 RNA_pol_Rpb1_1 PF04997 4.3e-96 2
ENSSSCP00030012336 RNA_pol_Rpb1_5 PF04998 8.7e-89 3
ENSSSCP00030012336 RNA_pol_Rpb1_2 PF00623 7.6e-75 4
ENSSSCP00030012336 RNA_pol_Rpb1_3 PF04983 8.4e-42 5
ENSSSCP00030012359 RNA_pol_Rpb1_4 PF05000 8.3e-32 1
ENSSSCP00030012359 RNA_pol_Rpb1_1 PF04997 2.5e-96 2
ENSSSCP00030012359 RNA_pol_Rpb1_5 PF04998 7.2e-89 3
ENSSSCP00030012359 RNA_pol_Rpb1_2 PF00623 7.6e-75 4
ENSSSCP00030012359 RNA_pol_Rpb1_3 PF04983 9e-42 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POLR3A-201 ENSSSCT00030027635 6292 1402aa ENSSSCP00030012336
POLR3A-203 ENSSSCT00030027688 4653 1390aa ENSSSCP00030012359
POLR3A-204 ENSSSCT00030027704 4338 1285aa ENSSSCP00030012368
POLR3A-202 ENSSSCT00030027714 4787 1284aa ENSSSCP00030012373

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003000580438.872724.3463sus_scrofa_rongchangENSSSCP0003001233647.717529.8859
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003004886938.6225.0772sus_scrofa_rongchangENSSSCP0003001233653.49534.7361

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.500798.3595equus_caballusENSECAP0000004959799.500798.3595
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233610099.9287sus_scrofa_landraceENSSSCP0004503517410099.9287
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofaENSSSCP00000011013100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofa_usmarcENSSSCP00070002709100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233698.716198.7161sus_scrofa_wuzhishanENSSSCP0000503283898.716198.7161
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofa_jinhuaENSSSCP00060039053100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofa_hampshireENSSSCP00035003424100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233698.858898.0742bos_taurusENSBTAP0000001763899.712298.9209
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofa_largewhiteENSSSCP00025039892100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP00030012336100100sus_scrofa_meishanENSSSCP00040017614100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP00030012336100100sus_scrofa_berkshireENSSSCP00065026123100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233698.858897.7175ovis_aries_rambouilletENSOARP0002003422599.712298.5611
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233699.144199.1441sus_scrofa_bameiENSSSCP00050031986100100
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP0003001233683.452282.525sus_scrofa_tibetanENSSSCP0001500336696.455195.3833
ENSSSCG00030020005sus_scrofa_rongchangENSSSCP00030012336100100sus_scrofa_pietrainENSSSCP00055046879100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression