Description

Ensembl ID ENSSSCG00030009388 Gene ID 100518066 Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 82071 bases Strand Plus strand
Position LUXR01013063.1 : 1400821 - 1482891 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00030005804 RNA_pol_Rpb1_4 PF05000 3.5e-25 1
ENSSSCP00030005804 RNA_pol_Rpb1_1 PF04997 8.5e-22 2
ENSSSCP00030005804 RNA_pol_Rpb1_5 PF04998 2.7e-103 3
ENSSSCP00030005804 RNA_pol_Rpb1_2 PF00623 4.3e-70 4
ENSSSCP00030005804 RNA_pol_Rpb1_3 PF04983 3.2e-36 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00030012881 6111 1721aa ENSSSCP00030005804

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003001233647.717529.8859sus_scrofa_rongchangENSSSCP0003000580438.872724.3463
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003004886936.457322.3996sus_scrofa_rongchangENSSSCP0003000580441.138925.276

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580495.874592.3881equus_caballusENSECAP0000000875395.930292.4419
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580495.874592.3881equus_caballusENSECAP0000004000194.991491.5371
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580495.874592.3881equus_caballusENSECAP0000006311093.378689.983
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP00030005804100100sus_scrofa_landraceENSSSCP00045033288100100
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.941999.9419sus_scrofaENSSSCP00000008782100100
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.593399.5933sus_scrofa_usmarcENSSSCP0007004950499.941799.9417
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580496.223196.165sus_scrofa_wuzhishanENSSSCP0000502099299.102399.0425
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.883899.8838sus_scrofa_jinhuaENSSSCP0006002923099.941999.9419
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.883899.8257sus_scrofa_hampshireENSSSCP0003500014399.941999.8837
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580496.106992.33bos_taurusENSBTAP0000000849696.330892.5451
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.941999.8838sus_scrofa_largewhiteENSSSCP0002504740510099.9419
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP00030005804100100sus_scrofa_meishanENSSSCP00040000216100100
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.941999.9419sus_scrofa_berkshireENSSSCP00065023495100100
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580494.479990.645ovis_aries_rambouilletENSOARP0002000482896.555892.6366
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.883899.8838sus_scrofa_bameiENSSSCP0005001222399.941999.9419
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP0003000580499.883899.8838sus_scrofa_tibetanENSSSCP0001501845499.941999.9419
ENSSSCG00030009388sus_scrofa_rongchangENSSSCP00030005804100100sus_scrofa_pietrainENSSSCP00055031152100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression