RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00030004098 | Gene ID |
100525539 |
Accession |
- |
Symbol |
FXR1 |
Alias |
- |
Full Name |
FMR1 autosomal homolog 1 |
Status |
Confidence |
Length |
60506 bases |
Strand |
Plus strand |
Position |
LUXR01006382.1 : 243126 - 303631 |
RNA binding domain |
Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00030002349 |
Agenet |
PF05641 |
9.2e-15 |
1 |
ENSSSCP00030002349 |
Agenet |
PF05641 |
9.2e-15 |
2 |
ENSSSCP00030002349 |
FXR_C1 |
PF16096 |
4.9e-39 |
3 |
ENSSSCP00030002349 |
KH_1 |
PF00013 |
6.4e-17 |
4 |
ENSSSCP00030002349 |
KH_1 |
PF00013 |
6.4e-17 |
5 |
ENSSSCP00030002349 |
KH_9 |
PF17904 |
1.3e-36 |
6 |
ENSSSCP00030002349 |
FXMRP1_C_core |
PF12235 |
6.4e-34 |
7 |
ENSSSCP00030002349 |
FXMRP1_C_core |
PF12235 |
6.4e-34 |
8 |
ENSSSCP00030002327 |
Agenet |
PF05641 |
1.1e-14 |
1 |
ENSSSCP00030002327 |
Agenet |
PF05641 |
1.1e-14 |
2 |
ENSSSCP00030002327 |
FXR_C1 |
PF16096 |
5.3e-39 |
3 |
ENSSSCP00030002327 |
KH_1 |
PF00013 |
7.3e-17 |
4 |
ENSSSCP00030002327 |
KH_1 |
PF00013 |
7.3e-17 |
5 |
ENSSSCP00030002327 |
KH_9 |
PF17904 |
1.4e-36 |
6 |
ENSSSCP00030002327 |
FXMRP1_C_core |
PF12235 |
2e-54 |
7 |
ENSSSCP00030002356 |
Agenet |
PF05641 |
1.2e-14 |
1 |
ENSSSCP00030002356 |
Agenet |
PF05641 |
1.2e-14 |
2 |
ENSSSCP00030002356 |
FXR_C1 |
PF16096 |
4.9e-39 |
3 |
ENSSSCP00030002356 |
KH_1 |
PF00013 |
7e-17 |
4 |
ENSSSCP00030002356 |
KH_1 |
PF00013 |
7e-17 |
5 |
ENSSSCP00030002356 |
KH_9 |
PF17904 |
4e-16 |
6 |
ENSSSCP00030002356 |
FXMRP1_C_core |
PF12235 |
9.6e-33 |
7 |
ENSSSCP00030002356 |
FXMRP1_C_core |
PF12235 |
9.6e-33 |
8 |
ENSSSCP00030002388 |
Agenet |
PF05641 |
1.2e-14 |
1 |
ENSSSCP00030002388 |
Agenet |
PF05641 |
1.2e-14 |
2 |
ENSSSCP00030002388 |
FXR_C1 |
PF16096 |
1.2e-38 |
3 |
ENSSSCP00030002388 |
KH_1 |
PF00013 |
8.8e-17 |
4 |
ENSSSCP00030002388 |
KH_1 |
PF00013 |
8.8e-17 |
5 |
ENSSSCP00030002388 |
KH_9 |
PF17904 |
1.6e-36 |
6 |
ENSSSCP00030002388 |
FXMRP1_C_core |
PF12235 |
2.2e-54 |
7 |
ENSSSCP00030002313 |
Agenet |
PF05641 |
1.8e-14 |
1 |
ENSSSCP00030002313 |
FXR_C1 |
PF16096 |
1.4e-38 |
2 |
ENSSSCP00030002313 |
KH_1 |
PF00013 |
1.1e-16 |
3 |
ENSSSCP00030002313 |
KH_1 |
PF00013 |
1.1e-16 |
4 |
ENSSSCP00030002313 |
KH_9 |
PF17904 |
1.6e-36 |
5 |
ENSSSCP00030002313 |
FXMRP1_C_core |
PF12235 |
2.3e-54 |
6 |
ENSSSCP00030002434 |
Agenet |
PF05641 |
2.2e-08 |
1 |
ENSSSCP00030002434 |
FXR_C1 |
PF16096 |
4.5e-39 |
2 |
ENSSSCP00030002434 |
KH_1 |
PF00013 |
5.6e-17 |
3 |
ENSSSCP00030002434 |
KH_1 |
PF00013 |
5.6e-17 |
4 |
ENSSSCP00030002434 |
KH_9 |
PF17904 |
1.2e-36 |
5 |
ENSSSCP00030002434 |
FXMRP1_C_core |
PF12235 |
6.3e-33 |
6 |
ENSSSCP00030002434 |
FXMRP1_C_core |
PF12235 |
6.3e-33 |
7 |
ENSSSCP00030002413 |
Agenet |
PF05641 |
2.6e-08 |
1 |
ENSSSCP00030002413 |
FXR_C1 |
PF16096 |
1.1e-38 |
2 |
ENSSSCP00030002413 |
KH_1 |
PF00013 |
7.9e-17 |
3 |
ENSSSCP00030002413 |
KH_1 |
PF00013 |
7.9e-17 |
4 |
ENSSSCP00030002413 |
KH_9 |
PF17904 |
1.5e-36 |
5 |
ENSSSCP00030002413 |
FXMRP1_C_core |
PF12235 |
1.9e-54 |
6 |
ENSSSCP00030002406 |
Agenet |
PF05641 |
3.1e-08 |
1 |
ENSSSCP00030002406 |
FXR_C1 |
PF16096 |
1.4e-38 |
2 |
ENSSSCP00030002406 |
KH_1 |
PF00013 |
9.6e-17 |
3 |
ENSSSCP00030002406 |
KH_1 |
PF00013 |
9.6e-17 |
4 |
ENSSSCP00030002406 |
KH_9 |
PF17904 |
1.5e-36 |
5 |
ENSSSCP00030002406 |
FXMRP1_C_core |
PF12235 |
2.3e-54 |
6 |
ENSSSCP00030002399 |
Agenet |
PF05641 |
7.3e-06 |
1 |
ENSSSCP00030002399 |
FXR_C1 |
PF16096 |
4.3e-39 |
2 |
ENSSSCP00030002399 |
KH_1 |
PF00013 |
5.1e-17 |
3 |
ENSSSCP00030002399 |
KH_1 |
PF00013 |
5.1e-17 |
4 |
ENSSSCP00030002399 |
KH_9 |
PF17904 |
1.1e-36 |
5 |
ENSSSCP00030002399 |
FXMRP1_C_core |
PF12235 |
4.9e-34 |
6 |
ENSSSCP00030002399 |
FXMRP1_C_core |
PF12235 |
4.9e-34 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
FXR1-201 |
ENSSSCT00030005623 |
3009 |
677aa |
ENSSSCP00030002313 |
FXR1-202 |
ENSSSCT00030005647 |
3122 |
568aa |
ENSSSCP00030002327 |
FXR1-203 |
ENSSSCT00030005687 |
3035 |
539aa |
ENSSSCP00030002349 |
FXR1-204 |
ENSSSCT00030005699 |
2670 |
582aa |
ENSSSCP00030002356 |
FXR1-205 |
ENSSSCT00030005742 |
6600 |
604aa |
ENSSSCP00030002388 |
FXR1-206 |
ENSSSCT00030005756 |
2864 |
490aa |
ENSSSCP00030002399 |
FXR1-209 |
ENSSSCT00030005769 |
3178 |
646aa |
ENSSSCP00030002406 |
FXR1-208 |
ENSSSCT00030005776 |
6496 |
573aa |
ENSSSCP00030002413 |
FXR1-207 |
ENSSSCT00030005800 |
1521 |
506aa |
ENSSSCP00030002434 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030048694 | 70.6704 | 60.6145 | sus_scrofa_rongchang | ENSSSCP00030002313 | 74.7415 | 64.1064 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030001010 | 67.0886 | 57.2785 | sus_scrofa_rongchang | ENSSSCP00030002313 | 62.6292 | 53.4712 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 99.5569 | 99.4092 | equus_caballus | ENSECAP00000023539 | 96.5616 | 96.4183 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045016997 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa | ENSSSCP00000023407 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070035232 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005006524 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060012232 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035026896 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 95.421 | 95.2733 | bos_taurus | ENSBTAP00000068817 | 99.6914 | 99.537 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025034378 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040017268 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065040113 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 90.2511 | 88.9217 | ovis_aries_rambouillet | ENSOARP00020007735 | 94 | 92.6154 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050013264 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 |
ENSSSCG00030004098 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055003371 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |