RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025072558 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
200157 bases |
Strand |
Minus strand |
Position |
LUXX01085380.1 : 3559111 - 3759267 |
RNA binding domain |
MutS_II |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025044173 |
MutS_II |
PF05188 |
9.7e-32 |
1 |
ENSSSCP00025044299 |
MutS_II |
PF05188 |
1e-31 |
1 |
ENSSSCP00025043982 |
MutS_II |
PF05188 |
1.1e-31 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00025099797 |
5941 |
1123aa |
ENSSSCP00025043982 |
- |
ENSSSCT00025100123 |
3898 |
1033aa |
ENSSSCP00025044173 |
- |
ENSSSCT00025100371 |
4014 |
1107aa |
ENSSSCP00025044299 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025029750 | 34.7762 | 20.4696 | sus_scrofa_largewhite | ENSSSCP00025043982 | 42.2084 | 24.8442 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025047770 | 39.7605 | 21.4371 | sus_scrofa_largewhite | ENSSSCP00025043982 | 29.5637 | 15.9394 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025030279 | 40.5435 | 22.6087 | sus_scrofa_largewhite | ENSSSCP00025043982 | 33.2146 | 18.5218 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025007293 | 46.2085 | 26.7773 | sus_scrofa_largewhite | ENSSSCP00025043982 | 17.3642 | 10.0623 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 99.8219 | 99.7329 | sus_scrofa_pietrain | ENSSSCP00055004635 | 99.8219 | 99.7329 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 99.9109 | 99.8219 | sus_scrofa | ENSSSCP00000040629 | 99.9109 | 99.8219 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 100 | 99.9109 | sus_scrofa_bamei | ENSSSCP00050038822 | 100 | 99.9109 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 94.5681 | 90.0267 | equus_caballus | ENSECAP00000008386 | 94.0655 | 89.5483 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 90.8281 | 90.7391 | sus_scrofa_wuzhishan | ENSSSCP00005015363 | 92.1409 | 92.0506 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 78.4506 | 78.0053 | sus_scrofa_tibetan | ENSSSCP00015039927 | 99.7735 | 99.2072 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 100 | 99.9109 | sus_scrofa_rongchang | ENSSSCP00030026777 | 100 | 99.9109 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065044943 | 100 | 100 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 99.9109 | 99.8219 | sus_scrofa_meishan | ENSSSCP00040000441 | 99.9109 | 99.8219 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 96.5272 | 96.4381 | sus_scrofa_usmarc | ENSSSCP00070010530 | 100 | 99.9077 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 100 | 99.9109 | sus_scrofa_jinhua | ENSSSCP00060017601 | 100 | 99.9109 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 100 | 99.9109 | sus_scrofa_hampshire | ENSSSCP00035024251 | 100 | 99.9109 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 94.8353 | 90.8281 | ovis_aries_rambouillet | ENSOARP00020021006 | 95.2594 | 91.2343 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 91.3624 | 87.2663 | bos_taurus | ENSBTAP00000058894 | 94.8244 | 90.573 |
ENSSSCG00025072558 | sus_scrofa_largewhite | ENSSSCP00025043982 | 96.26 | 95.6367 | sus_scrofa_landrace | ENSSSCP00045043950 | 96.0889 | 95.4667 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |