Description

Ensembl ID ENSSSCG00025072558 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 200157 bases Strand Minus strand
Position LUXX01085380.1 : 3559111 - 3759267 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025044173 MutS_II PF05188 9.7e-32 1
ENSSSCP00025044299 MutS_II PF05188 1e-31 1
ENSSSCP00025043982 MutS_II PF05188 1.1e-31 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025099797 5941 1123aa ENSSSCP00025043982
- ENSSSCT00025100123 3898 1033aa ENSSSCP00025044173
- ENSSSCT00025100371 4014 1107aa ENSSSCP00025044299

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002502975034.776220.4696sus_scrofa_largewhiteENSSSCP0002504398242.208424.8442
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504777039.760521.4371sus_scrofa_largewhiteENSSSCP0002504398229.563715.9394
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002503027940.543522.6087sus_scrofa_largewhiteENSSSCP0002504398233.214618.5218
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002500729346.208526.7773sus_scrofa_largewhiteENSSSCP0002504398217.364210.0623

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398299.821999.7329sus_scrofa_pietrainENSSSCP0005500463599.821999.7329
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398299.910999.8219sus_scrofaENSSSCP0000004062999.910999.8219
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398210099.9109sus_scrofa_bameiENSSSCP0005003882210099.9109
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398294.568190.0267equus_caballusENSECAP0000000838694.065589.5483
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398290.828190.7391sus_scrofa_wuzhishanENSSSCP0000501536392.140992.0506
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398278.450678.0053sus_scrofa_tibetanENSSSCP0001503992799.773599.2072
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398210099.9109sus_scrofa_rongchangENSSSCP0003002677710099.9109
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP00025043982100100sus_scrofa_berkshireENSSSCP00065044943100100
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398299.910999.8219sus_scrofa_meishanENSSSCP0004000044199.910999.8219
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398296.527296.4381sus_scrofa_usmarcENSSSCP0007001053010099.9077
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398210099.9109sus_scrofa_jinhuaENSSSCP0006001760110099.9109
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398210099.9109sus_scrofa_hampshireENSSSCP0003502425110099.9109
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398294.835390.8281ovis_aries_rambouilletENSOARP0002002100695.259491.2343
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398291.362487.2663bos_taurusENSBTAP0000005889494.824490.573
ENSSSCG00025072558sus_scrofa_largewhiteENSSSCP0002504398296.2695.6367sus_scrofa_landraceENSSSCP0004504395096.088995.4667

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression