RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025067269 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
67737 bases |
Strand |
Plus strand |
Position |
LUXX01070791.1 : 2733865 - 2801601 |
RNA binding domain |
ResIII , DEAD , RIG-I_C , RIG-I_C-RD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025040898 |
ResIII |
PF04851 |
8.3e-15 |
1 |
ENSSSCP00025040898 |
DEAD |
PF00270 |
3.5e-15 |
2 |
ENSSSCP00025040898 |
RIG-I_C |
PF18119 |
4.3e-36 |
3 |
ENSSSCP00025040785 |
ResIII |
PF04851 |
8.5e-15 |
1 |
ENSSSCP00025040785 |
DEAD |
PF00270 |
3.3e-15 |
2 |
ENSSSCP00025040785 |
RIG-I_C |
PF18119 |
7.9e-39 |
3 |
ENSSSCP00025040785 |
RIG-I_C-RD |
PF11648 |
1.5e-35 |
4 |
ENSSSCP00025040673 |
ResIII |
PF04851 |
9.5e-15 |
1 |
ENSSSCP00025040673 |
DEAD |
PF00270 |
3.5e-15 |
2 |
ENSSSCP00025040673 |
RIG-I_C |
PF18119 |
8e-39 |
3 |
ENSSSCP00025040673 |
RIG-I_C-RD |
PF11648 |
1.6e-35 |
4 |
ENSSSCP00025040570 |
ResIII |
PF04851 |
9.8e-15 |
1 |
ENSSSCP00025040570 |
DEAD |
PF00270 |
3.9e-15 |
2 |
ENSSSCP00025040570 |
RIG-I_C |
PF18119 |
8.4e-39 |
3 |
ENSSSCP00025040570 |
RIG-I_C-RD |
PF11648 |
1.7e-35 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00025092454 |
3670 |
943aa |
ENSSSCP00025040570 |
- |
ENSSSCT00025092690 |
4398 |
902aa |
ENSSSCP00025040673 |
- |
ENSSSCT00025092940 |
4328 |
898aa |
ENSSSCP00025040785 |
- |
ENSSSCT00025093218 |
3249 |
906aa |
ENSSSCP00025040898 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025019188 | 50.514 | 31.4244 | sus_scrofa_largewhite | ENSSSCP00025040570 | 36.4793 | 22.6935 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025036234 | 46.0411 | 27.7615 | sus_scrofa_largewhite | ENSSSCP00025040570 | 49.947 | 30.1166 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.6819 | 99.5758 | sus_scrofa_pietrain | ENSSSCP00055019455 | 99.6819 | 99.5758 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.5758 | 99.3637 | sus_scrofa | ENSSSCP00000045260 | 99.6815 | 99.4692 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.6819 | 99.5758 | sus_scrofa_bamei | ENSSSCP00050014165 | 99.6819 | 99.5758 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 88.8653 | 80.2757 | equus_caballus | ENSECAP00000089346 | 82.0764 | 74.143 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.7879 | 99.6819 | sus_scrofa_wuzhishan | ENSSSCP00005007411 | 99.3664 | 99.2608 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 79.7455 | 78.473 | sus_scrofa_tibetan | ENSSSCP00015025196 | 96.6581 | 95.1157 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.7879 | 99.5758 | sus_scrofa_rongchang | ENSSSCP00030029992 | 99.7879 | 99.5758 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 57.7943 | 57.6882 | sus_scrofa_berkshire | ENSSSCP00065000285 | 98.9111 | 98.7296 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.7879 | 99.6819 | sus_scrofa_meishan | ENSSSCP00040012828 | 99.7879 | 99.6819 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.0456 | 98.7275 | sus_scrofa_usmarc | ENSSSCP00070029855 | 98.7315 | 98.4144 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.6819 | 99.5758 | sus_scrofa_jinhua | ENSSSCP00060039880 | 99.6819 | 99.5758 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.7879 | 99.6819 | sus_scrofa_hampshire | ENSSSCP00035001765 | 99.7879 | 99.6819 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 90.7741 | 82.5026 | ovis_aries_rambouillet | ENSOARP00020011973 | 82.2286 | 74.7358 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 91.4104 | 82.9268 | bos_taurus | ENSBTAP00000053514 | 84.7591 | 76.8928 |
ENSSSCG00025067269 | sus_scrofa_largewhite | ENSSSCP00025040570 | 99.7879 | 99.6819 | sus_scrofa_landrace | ENSSSCP00045043672 | 99.7879 | 99.6819 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |