Description

Ensembl ID ENSSSCG00025067269 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 67737 bases Strand Plus strand
Position LUXX01070791.1 : 2733865 - 2801601 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025040898 ResIII PF04851 8.3e-15 1
ENSSSCP00025040898 DEAD PF00270 3.5e-15 2
ENSSSCP00025040898 RIG-I_C PF18119 4.3e-36 3
ENSSSCP00025040785 ResIII PF04851 8.5e-15 1
ENSSSCP00025040785 DEAD PF00270 3.3e-15 2
ENSSSCP00025040785 RIG-I_C PF18119 7.9e-39 3
ENSSSCP00025040785 RIG-I_C-RD PF11648 1.5e-35 4
ENSSSCP00025040673 ResIII PF04851 9.5e-15 1
ENSSSCP00025040673 DEAD PF00270 3.5e-15 2
ENSSSCP00025040673 RIG-I_C PF18119 8e-39 3
ENSSSCP00025040673 RIG-I_C-RD PF11648 1.6e-35 4
ENSSSCP00025040570 ResIII PF04851 9.8e-15 1
ENSSSCP00025040570 DEAD PF00270 3.9e-15 2
ENSSSCP00025040570 RIG-I_C PF18119 8.4e-39 3
ENSSSCP00025040570 RIG-I_C-RD PF11648 1.7e-35 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025092454 3670 943aa ENSSSCP00025040570
- ENSSSCT00025092690 4398 902aa ENSSSCP00025040673
- ENSSSCT00025092940 4328 898aa ENSSSCP00025040785
- ENSSSCT00025093218 3249 906aa ENSSSCP00025040898

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002501918850.51431.4244sus_scrofa_largewhiteENSSSCP0002504057036.479322.6935
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002503623446.041127.7615sus_scrofa_largewhiteENSSSCP0002504057049.94730.1166

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.681999.5758sus_scrofa_pietrainENSSSCP0005501945599.681999.5758
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.575899.3637sus_scrofaENSSSCP0000004526099.681599.4692
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.681999.5758sus_scrofa_bameiENSSSCP0005001416599.681999.5758
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057088.865380.2757equus_caballusENSECAP0000008934682.076474.143
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.787999.6819sus_scrofa_wuzhishanENSSSCP0000500741199.366499.2608
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057079.745578.473sus_scrofa_tibetanENSSSCP0001502519696.658195.1157
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.787999.5758sus_scrofa_rongchangENSSSCP0003002999299.787999.5758
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057057.794357.6882sus_scrofa_berkshireENSSSCP0006500028598.911198.7296
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.787999.6819sus_scrofa_meishanENSSSCP0004001282899.787999.6819
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.045698.7275sus_scrofa_usmarcENSSSCP0007002985598.731598.4144
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.681999.5758sus_scrofa_jinhuaENSSSCP0006003988099.681999.5758
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.787999.6819sus_scrofa_hampshireENSSSCP0003500176599.787999.6819
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057090.774182.5026ovis_aries_rambouilletENSOARP0002001197382.228674.7358
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057091.410482.9268bos_taurusENSBTAP0000005351484.759176.8928
ENSSSCG00025067269sus_scrofa_largewhiteENSSSCP0002504057099.787999.6819sus_scrofa_landraceENSSSCP0004504367299.787999.6819

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression