RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00025063530	Gene ID		Accession	-
Symbol	P4HA2	Alias	-	Full Name	NA
Status	Confidence	Length	93034 bases	Strand	Plus strand
Position	LUXX01067379.1 : 3035314 - 3128347	RNA binding domain	2OG-FeII_Oxy
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00025037944	2OG-FeII_Oxy	PF03171	1.5e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
P4HA2-201	ENSSSCT00025087107	2951	535aa	ENSSSCP00025037944

Gene Model

Click here to download ENSSSCG00025063530's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00025063530's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025001565	53.3088	34.375	sus_scrofa_largewhite	ENSSSCP00025037944	54.2056	34.9533
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025047485	75.6554	60.4869	sus_scrofa_largewhite	ENSSSCP00025037944	75.514	60.3738

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	98.1308	97.757	sus_scrofa_pietrain	ENSSSCP00055004202	94.5946	94.2342
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	100	100	sus_scrofa	ENSSSCP00000044447	100	100
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	100	100	sus_scrofa_bamei	ENSSSCP00050047657	100	100
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	94.0187	91.4019	equus_caballus	ENSECAP00000035453	77.7434	75.5796
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	99.6262	99.6262	sus_scrofa_wuzhishan	ENSSSCP00005044808	99.6262	99.6262
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	98.1308	97.757	sus_scrofa_tibetan	ENSSSCP00015016272	94.5946	94.2342
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	100	100	sus_scrofa_rongchang	ENSSSCP00030037200	100	100
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	98.1308	97.757	sus_scrofa_berkshire	ENSSSCP00065031044	94.5946	94.2342
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	97.9439	97.5701	sus_scrofa_meishan	ENSSSCP00040017350	94.4144	94.0541
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	98.1308	97.757	sus_scrofa_usmarc	ENSSSCP00070031833	94.5946	94.2342
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	94.7664	94.2056	sus_scrofa_jinhua	ENSSSCP00060029267	92.0145	91.4701
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	100	100	sus_scrofa_hampshire	ENSSSCP00035018826	100	100
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	96.4486	94.7664	ovis_aries_rambouillet	ENSOARP00020000548	96.4486	94.7664
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	97.0093	95.514	bos_taurus	ENSBTAP00000056064	97.0093	95.514
ENSSSCG00025063530	sus_scrofa_largewhite	ENSSSCP00025037944	98.1308	97.757	sus_scrofa_landrace	ENSSSCP00045013867	94.5946	94.2342

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression