Description

Ensembl ID ENSSSCG00025060664 Gene ID 100101927 Accession -
Symbol IFIH1 Alias - Full Name interferon induced with helicase C domain 1
Status Confidence Length 56852 bases Strand Minus strand
Position LUXX01090144.1 : 294580 - 351431 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025036488 ResIII PF04851 1.2e-19 1
ENSSSCP00025036488 DEAD PF00270 7.6e-18 2
ENSSSCP00025036488 RIG-I_C PF18119 8.8e-24 3
ENSSSCP00025036488 RIG-I_C-RD PF11648 3.6e-37 4
ENSSSCP00025036359 ResIII PF04851 1.2e-19 1
ENSSSCP00025036359 DEAD PF00270 7.9e-18 2
ENSSSCP00025036359 RIG-I_C PF18119 2.1e-22 3
ENSSSCP00025036359 RIG-I_C-RD PF11648 4e-37 4
ENSSSCP00025036234 ResIII PF04851 1.3e-19 1
ENSSSCP00025036234 DEAD PF00270 8.2e-18 2
ENSSSCP00025036234 RIG-I_C PF18119 9.4e-24 3
ENSSSCP00025036234 RIG-I_C-RD PF11648 4.2e-37 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
IFIH1-201 ENSSSCT00025083304 6415 1023aa ENSSSCP00025036234
IFIH1-202 ENSSSCT00025083575 6298 984aa ENSSSCP00025036359
IFIH1-203 ENSSSCT00025083857 6274 976aa ENSSSCP00025036488

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002501918863.729843.025sus_scrofa_largewhiteENSSSCP0002503623442.424228.6413
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002504057049.94730.1166sus_scrofa_largewhiteENSSSCP0002503623446.041127.7615

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_pietrainENSSSCP00055035032100100
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623499.902299.9022sus_scrofaENSSSCP0000004449199.902299.9022
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_bameiENSSSCP00050013921100100
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623490.811383.5777equus_caballusENSECAP0000000653290.545883.3333
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623499.60999.5112sus_scrofa_wuzhishanENSSSCP0000504457499.22199.1237
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623499.902299.9022sus_scrofa_tibetanENSSSCP0001500709299.902299.9022
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623499.902299.9022sus_scrofa_rongchangENSSSCP0003001214699.902299.9022
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_berkshireENSSSCP00065040181100100
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_meishanENSSSCP00040031772100100
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623494.428294.4282sus_scrofa_usmarcENSSSCP0007004304399.485199.4851
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623499.804599.7067sus_scrofa_jinhuaENSSSCP0006000698499.804599.7067
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_hampshireENSSSCP00035015516100100
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623493.255187.5855ovis_aries_rambouilletENSOARP0002001382693.255187.5855
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP0002503623492.961987.0968bos_taurusENSBTAP0000001070393.14487.2674
ENSSSCG00025060664sus_scrofa_largewhiteENSSSCP00025036234100100sus_scrofa_landraceENSSSCP00045004168100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression