RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025060664 | Gene ID |
100101927 |
Accession |
- |
Symbol |
IFIH1 |
Alias |
- |
Full Name |
interferon induced with helicase C domain 1 |
Status |
Confidence |
Length |
56852 bases |
Strand |
Minus strand |
Position |
LUXX01090144.1 : 294580 - 351431 |
RNA binding domain |
ResIII , DEAD , RIG-I_C , RIG-I_C-RD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025036488 |
ResIII |
PF04851 |
1.2e-19 |
1 |
ENSSSCP00025036488 |
DEAD |
PF00270 |
7.6e-18 |
2 |
ENSSSCP00025036488 |
RIG-I_C |
PF18119 |
8.8e-24 |
3 |
ENSSSCP00025036488 |
RIG-I_C-RD |
PF11648 |
3.6e-37 |
4 |
ENSSSCP00025036359 |
ResIII |
PF04851 |
1.2e-19 |
1 |
ENSSSCP00025036359 |
DEAD |
PF00270 |
7.9e-18 |
2 |
ENSSSCP00025036359 |
RIG-I_C |
PF18119 |
2.1e-22 |
3 |
ENSSSCP00025036359 |
RIG-I_C-RD |
PF11648 |
4e-37 |
4 |
ENSSSCP00025036234 |
ResIII |
PF04851 |
1.3e-19 |
1 |
ENSSSCP00025036234 |
DEAD |
PF00270 |
8.2e-18 |
2 |
ENSSSCP00025036234 |
RIG-I_C |
PF18119 |
9.4e-24 |
3 |
ENSSSCP00025036234 |
RIG-I_C-RD |
PF11648 |
4.2e-37 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
IFIH1-201 |
ENSSSCT00025083304 |
6415 |
1023aa |
ENSSSCP00025036234 |
IFIH1-202 |
ENSSSCT00025083575 |
6298 |
984aa |
ENSSSCP00025036359 |
IFIH1-203 |
ENSSSCT00025083857 |
6274 |
976aa |
ENSSSCP00025036488 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025019188 | 63.7298 | 43.025 | sus_scrofa_largewhite | ENSSSCP00025036234 | 42.4242 | 28.6413 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025040570 | 49.947 | 30.1166 | sus_scrofa_largewhite | ENSSSCP00025036234 | 46.0411 | 27.7615 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055035032 | 100 | 100 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 99.9022 | 99.9022 | sus_scrofa | ENSSSCP00000044491 | 99.9022 | 99.9022 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050013921 | 100 | 100 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 90.8113 | 83.5777 | equus_caballus | ENSECAP00000006532 | 90.5458 | 83.3333 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 99.609 | 99.5112 | sus_scrofa_wuzhishan | ENSSSCP00005044574 | 99.221 | 99.1237 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 99.9022 | 99.9022 | sus_scrofa_tibetan | ENSSSCP00015007092 | 99.9022 | 99.9022 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 99.9022 | 99.9022 | sus_scrofa_rongchang | ENSSSCP00030012146 | 99.9022 | 99.9022 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065040181 | 100 | 100 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040031772 | 100 | 100 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 94.4282 | 94.4282 | sus_scrofa_usmarc | ENSSSCP00070043043 | 99.4851 | 99.4851 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 99.8045 | 99.7067 | sus_scrofa_jinhua | ENSSSCP00060006984 | 99.8045 | 99.7067 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035015516 | 100 | 100 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 93.2551 | 87.5855 | ovis_aries_rambouillet | ENSOARP00020013826 | 93.2551 | 87.5855 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 92.9619 | 87.0968 | bos_taurus | ENSBTAP00000010703 | 93.144 | 87.2674 |
ENSSSCG00025060664 | sus_scrofa_largewhite | ENSSSCP00025036234 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045004168 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |