Description

Ensembl ID ENSSSCG00025054387 Gene ID Accession -
Symbol PLOD1 Alias - Full Name NA
Status Confidence Length 33462 bases Strand Minus strand
Position LUXX01074672.1 : 712031 - 745492 RNA binding domain 2OG-FeII_Oxy
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025032477 2OG-FeII_Oxy PF03171 4.7e-06 1
ENSSSCP00025032206 2OG-FeII_Oxy PF03171 4.8e-06 1
ENSSSCP00025032337 2OG-FeII_Oxy PF03171 4.9e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PLOD1-202 ENSSSCT00025074378 3327 725aa ENSSSCP00025032206
PLOD1-201 ENSSSCT00025074632 3279 726aa ENSSSCP00025032337
PLOD1-203 ENSSSCT00025074894 3572 724aa ENSSSCP00025032477

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002501393573.421156.7105sus_scrofa_largewhiteENSSSCP0002503233776.859559.3664
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503883973.521557.3925sus_scrofa_largewhiteENSSSCP0002503233775.344458.8154
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002500940230.658117.0144sus_scrofa_largewhiteENSSSCP0002503233726.308514.6006
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002502425529.712515.655sus_scrofa_largewhiteENSSSCP0002503233725.619813.4986
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002500870830.588217.6471sus_scrofa_largewhiteENSSSCP0002503233725.068914.4628

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP00025032337100100sus_scrofa_pietrainENSSSCP00055032978100100
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP00025032337100100sus_scrofaENSSSCP00000067980100100
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233794.214992.8375sus_scrofa_bameiENSSSCP0005001510894.344892.9655
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233795.7392.9752equus_caballusENSECAP0000002067390.849788.2353
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233794.077193.8017sus_scrofa_wuzhishanENSSSCP0000500154686.675186.4213
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233795.041393.2507sus_scrofa_tibetanENSSSCP0001500211495.172493.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.2452sus_scrofa_rongchangENSSSCP0003000315398.06997.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.2452sus_scrofa_berkshireENSSSCP0006503271998.06997.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.2452sus_scrofa_meishanENSSSCP0004002585598.06997.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.2452sus_scrofa_usmarcENSSSCP0007005038298.06997.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.2452sus_scrofa_jinhuaENSSSCP0006004397898.06997.3793
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP00025032337100100sus_scrofa_hampshireENSSSCP00035008624100100
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233796.556593.3884ovis_aries_rambouilletENSOARP0002001447996.556593.3884
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233796.28193.5262bos_taurusENSBTAP0000000265896.28193.5262
ENSSSCG00025054387sus_scrofa_largewhiteENSSSCP0002503233797.933997.1074sus_scrofa_landraceENSSSCP0004500450198.06997.2414

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression