Description

Ensembl ID ENSSSCG00025053006 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8528 bases Strand Plus strand
Position LUXX01057367.1 : 1760216 - 1768743 RNA binding domain PAT1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025031466 PAT1 PF09770 1.6e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025072624 1617 538aa ENSSSCP00025031466

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002502173539.531925.8778sus_scrofa_largewhiteENSSSCP0002503146656.505636.9888

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.814199.8141sus_scrofaENSSSCP0000007437999.814199.8141
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.628399.4424sus_scrofa_bameiENSSSCP0005000291499.628399.4424
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.442499.4424sus_scrofa_wuzhishanENSSSCP0000501277399.442499.4424
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146697.769597.5836sus_scrofa_tibetanENSSSCP0001503148795.117594.9367
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146660.22360.223sus_scrofa_berkshireENSSSCP00065021294100100
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.814199.8141sus_scrofa_meishanENSSSCP0004001385599.814199.8141
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.814199.8141sus_scrofa_jinhuaENSSSCP0006001009399.814199.8141
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.814199.8141sus_scrofa_hampshireENSSSCP0003500669999.814199.8141
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146684.944277.1375ovis_aries_rambouilletENSOARP0002002454085.902378.0075
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146659.293753.7175bos_taurusENSBTAP0000000203989.606781.1798
ENSSSCG00025053006sus_scrofa_largewhiteENSSSCP0002503146699.814199.8141sus_scrofa_landraceENSSSCP0004503365099.814199.8141

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression