Description

Ensembl ID ENSSSCG00025050582 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 28468 bases Strand Minus strand
Position LUXX01054371.1 : 2087778 - 2116245 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025029949 MutS_II PF05188 6e-10 1
ENSSSCP00025029887 MutS_II PF05188 6.6e-10 1
ENSSSCP00025030005 MutS_II PF05188 6.9e-10 1
ENSSSCP00025029820 MutS_II PF05188 7.7e-10 1
ENSSSCP00025029750 MutS_II PF05188 7.9e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025069069 6137 1363aa ENSSSCP00025029750
- ENSSSCT00025069251 6047 1333aa ENSSSCP00025029820
- ENSSSCT00025069406 5652 1231aa ENSSSCP00025029887
- ENSSSCT00025069529 6407 1182aa ENSSSCP00025029949
- ENSSSCT00025069650 5480 1236aa ENSSSCP00025030005

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002504398242.208424.8442sus_scrofa_largewhiteENSSSCP0002502975034.776220.4696
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002504777036.167718.3234sus_scrofa_largewhiteENSSSCP0002502975022.15711.2252
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002503027941.195722.9348sus_scrofa_largewhiteENSSSCP0002502975027.806315.4806
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002500729342.417126.3033sus_scrofa_largewhiteENSSSCP0002502975013.13288.1438

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.9266sus_scrofa_pietrainENSSSCP0005502887399.926699.9266
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.853399.7799sus_scrofaENSSSCP0000002776799.926699.8532
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.853399.7799sus_scrofa_bameiENSSSCP0005003217799.853399.7799
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975096.845294.2773equus_caballusENSECAP0000004612694.218491.7202
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975096.625196.405sus_scrofa_wuzhishanENSSSCP0000500658798.210397.9866
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.7065sus_scrofa_tibetanENSSSCP0001502686599.926699.7065
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.853399.8533sus_scrofa_rongchangENSSSCP0003000113599.853399.8533
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975097.725697.7256sus_scrofa_berkshireENSSSCP0006502183699.92599.925
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.9266sus_scrofa_meishanENSSSCP0004000599799.926699.9266
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.8533sus_scrofa_usmarcENSSSCP0007000092099.926699.8533
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.8533sus_scrofa_jinhuaENSSSCP0006001626999.926699.8533
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.9266sus_scrofa_hampshireENSSSCP0003503173399.926699.9266
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975096.478493.6904ovis_aries_rambouilletENSOARP0002000615096.620193.8281
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975090.755788.8481bos_taurusENSBTAP0000000186798.01995.9588
ENSSSCG00025050582sus_scrofa_largewhiteENSSSCP0002502975099.926699.9266sus_scrofa_landraceENSSSCP0004504112599.926699.9266

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression