Description

Ensembl ID ENSSSCG00025037427 Gene ID Accession -
Symbol PATL1 Alias - Full Name NA
Status Confidence Length 29922 bases Strand Plus strand
Position LUXX01062557.1 : 218235 - 248156 RNA binding domain PAT1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025021735 PAT1 PF09770 1.1e-17 1
ENSSSCP00025021748 PAT1 PF09770 1.2e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PATL1-201 ENSSSCT00025050940 4068 769aa ENSSSCP00025021735
PATL1-202 ENSSSCT00025050975 4003 719aa ENSSSCP00025021748

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002503146656.505636.9888sus_scrofa_largewhiteENSSSCP0002502173539.531925.8778

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP00025021735100100sus_scrofa_pietrainENSSSCP00055039732100100
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofaENSSSCP0000004786997.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP00025021735100100sus_scrofa_bameiENSSSCP00050035334100100
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173598.439596.3589equus_caballusENSECAP0000000969993.226691.2562
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofa_wuzhishanENSSSCP0000503864297.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofa_tibetanENSSSCP0001501249197.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofa_rongchangENSSSCP0003004716597.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofa_berkshireENSSSCP0006501094797.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173590.11788.9467sus_scrofa_meishanENSSSCP0004002689893.902492.6829
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.219898.9597sus_scrofa_usmarcENSSSCP0007004323897.321497.0663
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173599.609999.3498sus_scrofa_jinhuaENSSSCP0006000139897.455597.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173590.247189.2068sus_scrofa_hampshireENSSSCP0003503225796.927495.8101
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173598.179595.4486ovis_aries_rambouilletENSOARP0002002005897.924895.201
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP0002502173598.049495.7087bos_taurusENSBTAP0000006106593.548491.3151
ENSSSCG00025037427sus_scrofa_largewhiteENSSSCP00025021735100100sus_scrofa_landraceENSSSCP00045023615100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression