RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025037427 | Gene ID |
|
Accession |
- |
Symbol |
PATL1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
29922 bases |
Strand |
Plus strand |
Position |
LUXX01062557.1 : 218235 - 248156 |
RNA binding domain |
PAT1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025021735 |
PAT1 |
PF09770 |
1.1e-17 |
1 |
ENSSSCP00025021748 |
PAT1 |
PF09770 |
1.2e-16 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PATL1-201 |
ENSSSCT00025050940 |
4068 |
769aa |
ENSSSCP00025021735 |
PATL1-202 |
ENSSSCT00025050975 |
4003 |
719aa |
ENSSSCP00025021748 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025031466 | 56.5056 | 36.9888 | sus_scrofa_largewhite | ENSSSCP00025021735 | 39.5319 | 25.8778 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055039732 | 100 | 100 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa | ENSSSCP00000047869 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050035334 | 100 | 100 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 98.4395 | 96.3589 | equus_caballus | ENSECAP00000009699 | 93.2266 | 91.2562 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa_wuzhishan | ENSSSCP00005038642 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa_tibetan | ENSSSCP00015012491 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa_rongchang | ENSSSCP00030047165 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa_berkshire | ENSSSCP00065010947 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 90.117 | 88.9467 | sus_scrofa_meishan | ENSSSCP00040026898 | 93.9024 | 92.6829 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.2198 | 98.9597 | sus_scrofa_usmarc | ENSSSCP00070043238 | 97.3214 | 97.0663 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 99.6099 | 99.3498 | sus_scrofa_jinhua | ENSSSCP00060001398 | 97.4555 | 97.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 90.2471 | 89.2068 | sus_scrofa_hampshire | ENSSSCP00035032257 | 96.9274 | 95.8101 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 98.1795 | 95.4486 | ovis_aries_rambouillet | ENSOARP00020020058 | 97.9248 | 95.201 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 98.0494 | 95.7087 | bos_taurus | ENSBTAP00000061065 | 93.5484 | 91.3151 |
ENSSSCG00025037427 | sus_scrofa_largewhite | ENSSSCP00025021735 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045023615 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |